Gene Information gene info

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GENE：FYCO1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol FYCO1
FullNmae FYVE and coiled-coil domain autophagy adaptor 1
LocusType gene with protein product
Status Approved
HGNC_id HGNC:14673
EnsembleID ENSG00000163820
Uniprot Q9BQS8

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
FYCO1 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
FYCO1 autophagy 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
FYCO1 autophagy 36341760 The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns. regulator signature

Go Annotation:

GeneSymbol Go id
FYCO1 GO:0005515,GO:0005764,GO:0005764,GO:0005770,GO:0005770,GO:0005776,GO:0005776,GO:0005794,GO:0016020,GO:0043231,GO:0046872,GO:0072383,GO:0072383,GO:1901098,GO:1901098

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
FYCO1 hsa:79443 path:hsa05132 Salmonella infection - Homo sapiens (human)

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
FYCO1 MAP1LC3B 20100911 23180781 physical association anti tag coimmunoprecipitation,pull down InnateDB
FYCO1 FYCO1 20100911 23180781 physical association anti tag coimmunoprecipitation InnateDB

Source Target Pmid Interactiontype Methods Database
AR FYCO1 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
E2F4 FYCO1 17531812 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 FYCO1 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
FOXP3 FYCO1 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 FYCO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA FYCO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF FYCO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 FYCO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 FYCO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS FYCO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
GATA2 FYCO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A FYCO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF FYCO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 FYCO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
SPI1 FYCO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ZNF263 FYCO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000508C13 FYCO1 N/A 15685193 rna interference,inhibition array technology miRSponge
URS0000508C13 FYCO1 15685193 25416803 mrna cleavage,inhibition array technology,array technology,experimental interaction detection TarBase
URS00002C0FCB FYCO1 20371350 25416803 mrna cleavage,inhibition nucleotide sequence identification TarBase
URS00000DDD35 FYCO1 20371350 22473208 25416803 mrna cleavage,inhibition nucleotide sequence identification,clip TarBase
URS00003D5391 FYCO1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00005651EE FYCO1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00000451A1 FYCO1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS0000042E1F FYCO1 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS00001E0AEA FYCO1 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS00000600E6 FYCO1 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS0000544FF1 FYCO1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00004DA9DB FYCO1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000535FDD FYCO1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00001B12A4 FYCO1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00001AFC71 FYCO1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000075A281 FYCO1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000013D17D FYCO1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000006FDD4 FYCO1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00001DE669 FYCO1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000005CF5F FYCO1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00002152A8 FYCO1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000065D58 FYCO1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000007FBA FYCO1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000298BA3 FYCO1 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS00002B3783 FYCO1 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS00002075FA FYCO1 22473208 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
PPL FYCO1 25348397 N/A physical interaction ComPPI
SGF29 FYCO1 25348397 N/A physical interaction ComPPI
SEC23B FYCO1 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
KIF5B FYCO1 20562859 24234451 25348397 25855459 physical association anti tag coimmunoprecipitation,pull down,physical interaction ComPPI,IntAct
EMD FYCO1 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LMNA FYCO1 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
GABARAPL2 FYCO1 20562859 24234451 25348397 physical association pull down ComPPI,IntAct
MAP1LC3B FYCO1 20562859 24089205 24234451 25348397 association,physical association anti tag coimmunoprecipitation,pull down,physical interaction,tandem affinity purification ComPPI,IntAct
BORCS6 FYCO1 25348397 N/A physical interaction ComPPI
RPA1 FYCO1 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
XPO1 FYCO1 25348397 N/A physical interaction ComPPI
RPA2 FYCO1 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
RPA3 FYCO1 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
TMPO FYCO1 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
DTNA FYCO1 25348397 N/A physical interaction ComPPI
TCP1 FYCO1 25348397 N/A physical interaction ComPPI
CCT7 FYCO1 25348397 N/A physical interaction ComPPI
RAF1 FYCO1 25348397 N/A physical interaction ComPPI
GABARAP FYCO1 20562859 24234451 25348397 physical association pull down ComPPI,IntAct
MAP1LC3A FYCO1 20562859 24234451 25348397 association,physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
HIF1AN FYCO1 24234451 25348397 29426014 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
PAX6 FYCO1 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
TRIM25 FYCO1 25348397 N/A physical interaction ComPPI
GOPC FYCO1 25348397 N/A physical interaction ComPPI
KDM1A FYCO1 23455924 24234451 25348397 physical association anti tag coimmunoprecipitation,two hybrid,physical interaction ComPPI,IntAct
CCAR1 FYCO1 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
KIF23 FYCO1 25348397 N/A physical interaction ComPPI
IQCB1 FYCO1 21565611 24234451 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SEC24B FYCO1 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
TCP10L FYCO1 25348397 N/A physical interaction ComPPI
KLC2 FYCO1 24234451 25348397 25855459 27898060 physical association pull down,physical interaction ComPPI,IntAct,OmniPath
POLDIP3 FYCO1 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
MAP4 FYCO1 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
CYLD FYCO1 25348397 N/A physical interaction ComPPI
GABARAPL1 FYCO1 20562859 24234451 25348397 physical association pull down ComPPI,IntAct
AP5Z1 FYCO1 25348397 N/A physical interaction ComPPI
CCT2 FYCO1 25348397 N/A physical interaction ComPPI
CCT6A FYCO1 25348397 N/A physical interaction ComPPI
PRMT6 FYCO1 23455924 24234451 25348397 physical association anti tag coimmunoprecipitation,two hybrid,physical interaction ComPPI,IntAct
APP FYCO1 25348397 N/A physical interaction ComPPI
CCT3 FYCO1 25348397 N/A physical interaction ComPPI
FOXK1 FYCO1 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
MOV10 FYCO1 25348397 N/A physical interaction ComPPI
TMPO FYCO1 25348397 N/A physical interaction ComPPI
CCT6B FYCO1 25348397 N/A physical interaction ComPPI
SASS6 FYCO1 25348397 N/A physical interaction ComPPI
TECPR1 FYCO1 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation ComPPI,IntAct
MAP1LC3C FYCO1 20562859 24234451 25348397 physical association pull down ComPPI,IntAct
FYCO1 RMC1 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
FYCO1 CCZ1B 25348397 N/A anti tag coimmunoprecipitation,physical interaction ComPPI
FYCO1 MON1B 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
FYCO1 MLYCD 25348397 N/A physical interaction ComPPI
FYCO1 TRUB2 25348397 N/A physical interaction ComPPI
FYCO1 DDX60 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
FYCO1 ADO 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
FYCO1 RFT1 25348397 N/A physical interaction ComPPI
NOL9 FYCO1 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
CCDC68 FYCO1 25348397 N/A physical interaction ComPPI
FYCO1 CCZ1 20562859 24234451 physical association anti tag coimmunoprecipitation IntAct
FYCO1 FYCO1 20562859 24234451 physical association anti tag coimmunoprecipitation IntAct
RRBP1 FYCO1 24234451 30021884 physical association cross-linking study IntAct
RAB7A FYCO1 20100911 27898060 stimulant N/A OmniPath

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