Gene Information gene info

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GENE：TRIM68

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol TRIM68
FullNmae tripartite motif containing 68
LocusType gene with protein product
Status Approved
HGNC_id HGNC:21161
EnsembleID ENSG00000167333
Uniprot Q6AZZ1

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
TRIM68 autophagy 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
TRIM68 autophagy 36341760 The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns. regulator signature

Go Annotation:

GeneSymbol Go id
TRIM68 GO:0000209,GO:0004842,GO:0005515,GO:0005634,GO:0005654,GO:0005654,GO:0005730,GO:0005737,GO:0005737,GO:0005794,GO:0005829,GO:0005829,GO:0005829,GO:0008270,GO:0010508,GO:0019901,GO:0032880,GO:0035035,GO:0042802,GO:0042803,GO:0043123,GO:0045087,GO:0046596,GO:0048471,GO:0050681,GO:0051092,GO:0051865,GO:0060765,GO:0061630

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 TRIM68 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
YBX1 TRIM68 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 TRIM68 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF TRIM68 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS TRIM68 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00000F31F4 TRIM68 19074876 25416803 mrna cleavage,inhibition array technology TarBase
URS00000B59A2 TRIM68 19074876 25416803 mrna cleavage,inhibition array technology TarBase
URS000003ABC4 TRIM68 19088304 25416803 mrna cleavage,inhibition array technology TarBase
URS0000098B3B TRIM68 22805767 25416803 mrna cleavage,inhibition western blot,quantitative reverse transcription pcr,miRNA interference luciferase reporter assay TarBase
URS0000076995 TRIM68 22805767 25416803 mrna cleavage,inhibition western blot,quantitative reverse transcription pcr,miRNA interference luciferase reporter assay TarBase
URS00006DE17B TRIM68 23706177 25416803 mrna cleavage,inhibition clip TarBase
URS000075C4B1 TRIM68 23706177 25416803 mrna cleavage,inhibition clip TarBase
URS00002075FA TRIM68 23706177 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
TRIM68 AR 25361965 interaction type N/A PTMCode2
AR TRIM68 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
LENG1 TRIM68 25348397 N/A physical interaction ComPPI
VIM TRIM68 25348397 N/A physical interaction ComPPI
IFI30 TRIM68 25348397 N/A physical interaction ComPPI
TMEM139 TRIM68 25348397 N/A physical interaction ComPPI
GRAP2 TRIM68 25348397 N/A physical interaction ComPPI
VEGFB TRIM68 25348397 N/A physical interaction ComPPI
AR TRIM68 25348397 N/A physical interaction ComPPI
HSP90B1 TRIM68 25348397 N/A physical interaction ComPPI
PILRA TRIM68 25348397 N/A physical interaction ComPPI
HNRNPL TRIM68 25348397 N/A physical interaction ComPPI
CCN2 TRIM68 25348397 N/A physical interaction ComPPI
COLQ TRIM68 25348397 N/A physical interaction ComPPI
GPS2 TRIM68 25348397 N/A physical interaction ComPPI
UBE2D3 TRIM68 25348397 N/A physical interaction ComPPI
GNRH1 TRIM68 25348397 N/A physical interaction ComPPI
TFG TRIM68 24999993 25348397 27898060 N/A physical interaction ComPPI,OmniPath
NLRP1 TRIM68 25348397 N/A physical interaction ComPPI
BTN1A1 TRIM68 25348397 N/A physical interaction ComPPI
PLPP1 TRIM68 25348397 N/A physical interaction ComPPI
LNX1 TRIM68 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
AGFG2 TRIM68 25348397 N/A physical interaction ComPPI
INCA1 TRIM68 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
POLR2G TRIM68 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
AHDC1 TRIM68 25348397 N/A physical interaction ComPPI
KAT5 TRIM68 25348397 N/A physical interaction ComPPI
PRELP TRIM68 25348397 N/A physical interaction ComPPI
CCN5 TRIM68 25348397 N/A physical interaction ComPPI
NTF4 TRIM68 25348397 N/A physical interaction ComPPI
TRIM68 UBE2U 19690564 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
TRIM68 COLEC11 25348397 N/A physical interaction ComPPI
TRIM68 PRSS48 25348397 N/A physical interaction ComPPI
TRIM68 MMP28 25348397 N/A physical interaction ComPPI
TRIM68 GCNT2 25348397 N/A physical interaction ComPPI
TRIM68 IGLL5 25348397 N/A physical interaction ComPPI
TRIM68 AUNIP 25348397 N/A physical interaction ComPPI
TRIM68 SMR3A 25348397 N/A physical interaction ComPPI
TRIM68 NUDT16L1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
TRIM68 ZBTB42 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
TRIM68 KRTAP13-2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
TRIM68 LZTFL1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
C1ORF105 TRIM68 25348397 N/A physical interaction ComPPI
KRTAP13-3 TRIM68 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
TRIM68 TRIM68 24234451 physical association two hybrid array,two hybrid prey pooling approach IntAct

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