GENE：ARID3B
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | ARID3B |
| FullNmae | AT-rich interaction domain 3B |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:14350 |
| EnsembleID | ENSG00000179361 |
| Uniprot | Q8IVW6 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| ARID3B | autosis | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
| ARID3B | apoptosis | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| ARID3B | GO:0003677,GO:0005515,GO:0005634,GO:0005634,GO:0005654,GO:0006357,GO:0008150,GO:0045944 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| AR | ARID3B | 20610535 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| ETS1 | ARID3B | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| GATA1 | ARID3B | 19941826 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| GATA2 | ARID3B | 18971253 19941826 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| YBX1 | ARID3B | 19151767 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| SMARCA4 | ARID3B | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CEBPA | ARID3B | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CTCF | ARID3B | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| E2F4 | ARID3B | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EGR1 | ARID3B | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXA1 | ARID3B | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXP1 | ARID3B | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOS | ARID3B | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| MITF | ARID3B | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| SPI1 | ARID3B | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TRIM28 | ARID3B | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TAL1 | ARID3B | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| E2F2 | ARID3B | N/A | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS00001F0C23 | ARID3B | 19881956 \N | rna interference,inhibition | experimental interaction detection,western blot,quantitative reverse transcription pcr,miRNA interference luciferase reporter assay | miRSponge |
| URS00001F0C23 | ARID3B | 18927107 19881956 25416803 | mrna cleavage,inhibition | experimental interaction detection,western blot,quantitative reverse transcription pcr | miR2Disease,TarBase |
| URS0000237AF9 | ARID3B | 18185580 25416803 | mrna cleavage,inhibition | array technology | TarBase |
| URS000003ABC4 | ARID3B | 19088304 25416803 | mrna cleavage,inhibition | array technology | TarBase |
| URS0000236310 | ARID3B | 23622248 25416803 | mrna cleavage,inhibition | clash | TarBase |
| URS0000324096 | ARID3B | 20371350 21572407 23446348 23622248 25416803 | mrna cleavage,inhibition | clip,clash | TarBase |
| URS0000031E12 | ARID3B | 20371350 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000A07C1 | ARID3B | 20371350 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000000B1C9 | ARID3B | 20371350 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000122ED0 | ARID3B | 20371350 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000029979D | ARID3B | 20371350 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000237CBD | ARID3B | 20371350 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000019F055 | ARID3B | 20371350 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00002AB575 | ARID3B | 20371350 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000037E170 | ARID3B | 20371350 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000032EF64 | ARID3B | 20371350 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000023133F | ARID3B | 20371350 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00004DA9DB | ARID3B | 20371350 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00004900F1 | ARID3B | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| GOLGA2 | ARID3B | 24234451 25348397 29568061 | association | proximity-dependent biotin identification | ComPPI,IntAct |
| LMNA | ARID3B | 24234451 25348397 29568061 | association | proximity-dependent biotin identification | ComPPI,IntAct |
| ARID3A | ARID3B | 25348397 | N/A | physical interaction | ComPPI |
| JUN | ARID3B | 24234451 25348397 25609649 | association | physical interaction,tandem affinity purification | ComPPI,IntAct |
| RB1 | ARID3B | 10446990 14525934 25348397 27898060 | N/A | experimental interaction detection,physical interaction,in vitro | ComPPI,HPRD,OmniPath |
| AR | ARID3B | 25348397 | N/A | physical interaction | ComPPI |
| ARID3B | MEPCE | 25348397 | N/A | physical interaction | ComPPI |
| ARID3B | CDK9 | 25348397 | N/A | physical interaction | ComPPI |
| ARID3B | IRF9 | 25348397 | N/A | physical interaction | ComPPI |
| ARID3B | TINF2 | 21044950 24234451 25348397 | physical association | pull down,physical interaction,bimolecular fluorescence complementation | ComPPI,IntAct |
| ARID3B | POT1 | 21044950 24234451 25348397 | physical association | physical interaction,bimolecular fluorescence complementation | ComPPI,IntAct |
| ARID3B | APP | 25348397 | N/A | physical interaction | ComPPI |
| ARID3B | PPP3CC | 25348397 | N/A | physical interaction | ComPPI |
| ARID3B | RBPJ | 24234451 25348397 25609649 | association | physical interaction,tandem affinity purification | ComPPI,IntAct |
| ARID3B | FOXH1 | 24234451 25348397 25609649 | association | physical interaction,tandem affinity purification | ComPPI,IntAct |
| ARID3B | NANOG | 25348397 | N/A | physical interaction | ComPPI |
| ARID3B | NR3C1 | 25348397 | N/A | physical interaction | ComPPI |
| ARID3B | HELZ | 24234451 25348397 | physical association | physical interaction,inference by socio-affinity scoring | ComPPI,IntAct |
| SOX2 | ARID3B | 25348397 | N/A | physical interaction | ComPPI |
| ARID3B | CBX8 | 24234451 27505670 | association | chromatin immunoprecipitation assay | IntAct |
| MKI67 | ARID3B | 24234451 26949251 | association | anti tag coimmunoprecipitation | IntAct |
| H3-4 | ARID3B | 24234451 30021884 | physical association | cross-linking study | IntAct |