Gene Information gene info

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GENE：PSMD13

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol PSMD13
FullNmae proteasome 26S subunit, non-ATPase 13
LocusType gene with protein product
Status Approved
HGNC_id HGNC:9558
EnsembleID ENSG00000185627
Uniprot Q9UNM6

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
PSMD13 mitotic_cd 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
PSMD13 apoptosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
PSMD13 GO:0000502,GO:0000502,GO:0005198,GO:0005576,GO:0005634,GO:0005634,GO:0005654,GO:0005829,GO:0005829,GO:0005838,GO:0006511,GO:0007127,GO:0008541,GO:0016020,GO:0022624,GO:0034774,GO:0043161,GO:1904813

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
PSMD13 hsa:5719 path:hsa03050 Proteasome - Homo sapiens (human)
PSMD13 hsa:5719 path:hsa05010 Alzheimer disease - Homo sapiens (human)
PSMD13 hsa:5719 path:hsa05012 Parkinson disease - Homo sapiens (human)
PSMD13 hsa:5719 path:hsa05014 Amyotrophic lateral sclerosis - Homo sapiens (human)
PSMD13 hsa:5719 path:hsa05016 Huntington disease - Homo sapiens (human)
PSMD13 hsa:5719 path:hsa05017 Spinocerebellar ataxia - Homo sapiens (human)
PSMD13 hsa:5719 path:hsa05020 Prion disease - Homo sapiens (human)
PSMD13 hsa:5719 path:hsa05022 Pathways of neurodegeneration - multiple diseases - Homo sapiens (human)
PSMD13 hsa:5719 path:hsa05169 Epstein-Barr virus infection - Homo sapiens (human)

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
PSMD13 TRAF6 14743216 23180781 physical association anti tag coimmunoprecipitation InnateDB

Source Target Pmid Interactiontype Methods Database
E2F4 PSMD13 17531812 18971253 trascriptional regulation,stimulation chromatin immunoprecipitation array,inferred by curator TFlink
ETS1 PSMD13 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
TP73 PSMD13 19558638 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 PSMD13 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF PSMD13 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 PSMD13 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 PSMD13 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 PSMD13 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ZNF263 PSMD13 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00000DDD35 PSMD13 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00003D5391 PSMD13 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000021D7C8 PSMD13 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS0000345DEB PSMD13 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00004AC389 PSMD13 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000016D2D4 PSMD13 23622248 25416803 mrna cleavage,inhibition clash TarBase

Source Target Pmid Interactiontype Methods Database
SNW1 PSMD13 20467437 24234451 25348397 association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
CDC5L PSMD13 20467437 24234451 25348397 association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
EIF1B PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
PAK2 PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
PSMC3 PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMC6 PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMD14 PSMD13 17353931 24234451 25348397 26496610 association,physical association anti bait coimmunoprecipitation,anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
TP53BP1 PSMD13 24234451 25348397 29656893 association proximity-dependent biotin identification ComPPI,IntAct
TRAF6 PSMD13 14525934 14743216 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,experimental interaction detection,physical interaction,in vitro,tandem affinity purification ComPPI,HPRD,IntAct
PSMD7 PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
DKK1 PSMD13 25348397 N/A physical interaction ComPPI
PPFIA1 PSMD13 25348397 N/A physical interaction ComPPI
PTPN6 PSMD13 25348397 N/A pull down ComPPI
KEAP1 PSMD13 25348397 N/A physical interaction ComPPI
PSMB2 PSMD13 25348397 N/A physical interaction ComPPI
INSIG2 PSMD13 25348397 N/A physical interaction ComPPI
GRB2 PSMD13 25348397 N/A physical interaction ComPPI
JUN PSMD13 24234451 25348397 25609649 association anti bait coimmunoprecipitation ComPPI,IntAct
DHX9 PSMD13 25348397 N/A physical interaction ComPPI
FLNC PSMD13 25348397 N/A physical interaction ComPPI
PSMA3 PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMD11 PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
FES PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
STRN3 PSMD13 25348397 N/A physical interaction ComPPI
UBC PSMD13 25348397 N/A physical interaction ComPPI
DLD PSMD13 24234451 25348397 29128334 association cross-linking study,physical interaction ComPPI,IntAct
NTRK1 PSMD13 25348397 N/A physical interaction ComPPI
PTPN2 PSMD13 25348397 N/A physical interaction ComPPI
PSMA1 PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMA6 PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMA5 PSMD13 25348397 N/A physical interaction ComPPI
PSMB9 PSMD13 25348397 N/A physical interaction ComPPI
MAP2 PSMD13 25348397 N/A physical interaction ComPPI
MAPK6 PSMD13 24234451 25348397 26972000 association anti tag coimmunoprecipitation ComPPI,IntAct
PSMD8 PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMB8 PSMD13 25348397 N/A physical interaction ComPPI
PSMD1 PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
RANBP9 PSMD13 25348397 N/A physical interaction ComPPI
TNIK PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
RBBP4 PSMD13 25348397 N/A physical interaction ComPPI
PSMC5 PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
ABCE1 PSMD13 25348397 N/A physical interaction ComPPI
UNC45A PSMD13 25348397 N/A physical interaction ComPPI
HUWE1 PSMD13 25348397 N/A physical interaction ComPPI
RAD23A PSMD13 25348397 N/A physical interaction ComPPI
HNRNPA2B1 PSMD13 25348397 N/A physical interaction ComPPI
VHL PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMC4 PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
NOS2 PSMD13 25348397 N/A physical interaction ComPPI
PSMD2 PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
VCAM1 PSMD13 22623428 24234451 25348397 association cross-linking study ComPPI,IntAct
HIF1AN PSMD13 24234451 25348397 26972000 association anti tag coimmunoprecipitation ComPPI,IntAct
RAD23B PSMD13 25348397 N/A physical interaction ComPPI
PRKN PSMD13 25348397 N/A physical interaction ComPPI
PSMD10 PSMD13 19490896 24234451 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMD4 PSMD13 16990800 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
FKBP8 PSMD13 25348397 N/A physical interaction ComPPI
SEM1 PSMD13 25348397 N/A physical interaction ComPPI
PSMB5 PSMD13 25348397 N/A physical interaction ComPPI
SRPK2 PSMD13 25348397 N/A physical interaction ComPPI
PSMC1 PSMD13 17353931 24234451 25348397 26496610 association,physical association anti bait coimmunoprecipitation,anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
STRN4 PSMD13 25348397 N/A physical interaction ComPPI
ESR2 PSMD13 24234451 25348397 25604459 association tandem affinity purification ComPPI,IntAct
BRCA1 PSMD13 25348397 N/A physical interaction ComPPI
PSMB4 PSMD13 25348397 N/A physical interaction ComPPI
PSMB1 PSMD13 25348397 N/A physical interaction ComPPI
PSMB3 PSMD13 25348397 N/A physical interaction ComPPI
PSMB7 PSMD13 25348397 N/A physical interaction ComPPI
PSMA7 PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMA4 PSMD13 25348397 N/A physical interaction ComPPI
RNF11 PSMD13 25348397 N/A physical interaction ComPPI
PSMD5 PSMD13 19490896 24234451 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
UCHL5 PSMD13 18922472 19490896 24234451 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
HNRNPA0 PSMD13 25348397 N/A physical interaction ComPPI
RPE65 PSMD13 25348397 N/A physical interaction ComPPI
MCC PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
ADRM1 PSMD13 24234451 24811749 25348397 association physical interaction,blue native page ComPPI,IntAct
PSMD13 PSMD12 14525934 16501559 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,experimental interaction detection,physical interaction,in vivo ComPPI,HPRD,IntAct
PSMD13 PSMD3 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMD13 PSMD6 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMD13 PSMC2 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMD13 MTHFD2 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMD13 SLC25A22 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMD13 CRB1 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMD13 USP14 19615732 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
PSMD13 SEM1 25348397 N/A physical interaction ComPPI
PSMD13 PSMA2 25348397 N/A physical interaction ComPPI
PSMD13 PSMB6 25348397 N/A physical interaction ComPPI
PSMD13 PSMA8 25348397 N/A physical interaction ComPPI
PSMD13 ZCCHC8 25348397 N/A physical interaction ComPPI
PSMD13 FN1 19738201 24234451 25348397 association cross-linking study,physical interaction ComPPI,IntAct
PSMD13 ABCF1 25348397 N/A physical interaction ComPPI
PSMD13 KCMF1 25348397 N/A physical interaction ComPPI
PSMD13 RPS21 25348397 N/A physical interaction ComPPI
PSMD13 RPS8 25348397 N/A physical interaction ComPPI
PSMD13 TXNL1 25348397 N/A physical interaction ComPPI
PSMD13 UBR4 25348397 N/A physical interaction ComPPI
PSMD13 CCDC74B 25348397 N/A physical interaction ComPPI
PSMD13 CCDC92 25348397 N/A physical interaction ComPPI
PSMD13 AMBRA1 25348397 N/A physical interaction ComPPI
PSMD13 PSMD9 25348397 N/A physical interaction ComPPI
PSMD13 PSMG2 25348397 N/A physical interaction ComPPI
PSMD13 ZFYVE19 25348397 N/A physical interaction ComPPI
PSMD13 POU5F1 25348397 N/A physical interaction ComPPI
PSMD13 INTU 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
PSMD13 CYLD 25348397 N/A physical interaction ComPPI
PSMD13 IKBKG 14743216 24234451 25348397 physical association tandem affinity purification ComPPI,IntAct
PSMD13 HLA-B 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
PSMD13 KSR1 24234451 25348397 27086506 association anti tag coimmunoprecipitation ComPPI,IntAct
PSMD13 PLEKHA7 24234451 25348397 28877994 association anti bait coimmunoprecipitation ComPPI,IntAct
UBLCP1 PSMD13 25348397 N/A physical interaction ComPPI
GH1 PSMD13 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
ECPAS PSMD13 25348397 N/A physical interaction ComPPI
METTL3 PSMD13 24234451 29507755 association anti tag coimmunoprecipitation IntAct
TRAF6 PSMD13 14743216 17353931 27898060 N/A N/A OmniPath

Source Target Pmid Interactiontype Methods Database
URS00009BB631 PSMD13 27087310 direct interaction,inhibition N/A NPInter

Visualization










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