Gene Information gene info

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GENE：DDX47

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol DDX47
FullNmae DEAD-box helicase 47
LocusType gene with protein product
Status Approved
HGNC_id HGNC:18682
EnsembleID ENSG00000213782
Uniprot Q9H0S4

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
DDX47 apoptosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
DDX47 apoptosis 36341760 The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns. regulator signature

Go Annotation:

GeneSymbol Go id
DDX47 GO:0003723,GO:0003724,GO:0005515,GO:0005524,GO:0005634,GO:0005654,GO:0005730,GO:0006364,GO:0006364,GO:0006397,GO:0008380,GO:0008625,GO:0016020,GO:0016887

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
APP DDX47 21832049 23180781 physical association protein array InnateDB
SRPK1 DDX47 23180781 23602568 phosphorylation reaction protein kinase assay InnateDB

Source Target Pmid Interactiontype Methods Database
AR DDX47 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 DDX47 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA2 DDX47 18971253 19941826 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
YBX1 DDX47 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
FOXP3 DDX47 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 DDX47 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF DDX47 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 DDX47 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXP1 DDX47 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS DDX47 18971253 trascriptional regulation,stimulation inferred by curator TFlink
SPI1 DDX47 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TAL1 DDX47 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000070B1D DDX47 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS0000183BED DDX47 23622248 25416803 mrna cleavage,inhibition clash TarBase

Source Target Pmid Interactiontype Methods Database
CDC5L DDX47 20467437 24234451 25348397 association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
KRAS DDX47 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
NPM1 DDX47 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
RPL10 DDX47 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
JUN DDX47 24234451 25348397 25609649 association anti bait coimmunoprecipitation ComPPI,IntAct
PRNP DDX47 18482256 24234451 25348397 N/A protein array,physical interaction ComPPI,IntAct
MYC DDX47 21150319 24234451 25348397 association tandem affinity purification ComPPI,IntAct
PARVA DDX47 25348397 N/A physical interaction ComPPI
HNRNPU DDX47 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
XPO1 DDX47 25348397 N/A physical interaction ComPPI
SRPK1 DDX47 23602568 24234451 25348397 phosphorylation reaction physical interaction,protein kinase assay ComPPI,IntAct
EGFR DDX47 25348397 N/A physical interaction ComPPI
GABARAP DDX47 15977068 24234451 25348397 27898060 physical association anti tag coimmunoprecipitation,two hybrid ComPPI,IntAct,OmniPath
EED DDX47 25348397 N/A physical interaction ComPPI
PRKN DDX47 25348397 N/A physical interaction ComPPI
TRA2B DDX47 25348397 N/A physical interaction ComPPI
CUL7 DDX47 25348397 N/A physical interaction ComPPI
NR3C1 DDX47 25348397 N/A physical interaction ComPPI
HDAC5 DDX47 25348397 N/A physical interaction ComPPI
EXOSC4 DDX47 25348397 N/A physical interaction ComPPI
CAND1 DDX47 25348397 N/A physical interaction ComPPI
FOXA1 DDX47 25348397 N/A physical interaction ComPPI
SART3 DDX47 19615732 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SRSF3 DDX47 25348397 N/A physical interaction ComPPI
AP2M1 DDX47 25348397 N/A physical interaction ComPPI
TRIM25 DDX47 25348397 N/A physical interaction ComPPI
MLH1 DDX47 20706999 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
ARIH1 DDX47 25348397 N/A physical interaction ComPPI
IFI16 DDX47 25348397 N/A physical interaction ComPPI
AGO2 DDX47 17932509 24234451 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
AGO1 DDX47 17932509 24234451 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
RRP1B DDX47 20926688 24234451 25348397 association anti tag coimmunoprecipitation,tandem affinity purification ComPPI,IntAct
NOL8 DDX47 25348397 N/A physical interaction ComPPI
HDGF DDX47 21907836 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
CYLD DDX47 25348397 N/A physical interaction ComPPI
FBL DDX47 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
POU5F1 DDX47 25348397 N/A physical interaction ComPPI
GTPBP4 DDX47 25348397 N/A physical interaction ComPPI
MNDA DDX47 24234451 25348397 25665578 association anti tag coimmunoprecipitation ComPPI,IntAct
WDR74 DDX47 25348397 N/A physical interaction ComPPI
DDX18 DDX47 25348397 N/A physical interaction ComPPI
NOP2 DDX47 25348397 N/A physical interaction ComPPI
FN1 DDX47 19738201 24234451 25348397 association cross-linking study,physical interaction ComPPI,IntAct
APP DDX47 25348397 N/A physical interaction ComPPI
POLR1C DDX47 25348397 N/A physical interaction ComPPI
DDX41 DDX47 24234451 25348397 25920683 association anti tag coimmunoprecipitation ComPPI,IntAct
G3BP1 DDX47 25348397 N/A physical interaction ComPPI
NCL DDX47 25348397 N/A physical interaction ComPPI
PRNP DDX47 25348397 N/A physical interaction ComPPI
DDX47 OBSL1 25348397 N/A physical interaction ComPPI
DDX47 CBWD1 25348397 N/A physical interaction ComPPI
DDX47 SIAE 25348397 N/A physical interaction ComPPI
DDX47 CCN6 25348397 N/A physical interaction ComPPI
DDX47 DCAF13 25348397 N/A physical interaction ComPPI
DDX47 NOP58 25348397 N/A physical interaction ComPPI
DDX47 RBM15B 25348397 N/A physical interaction ComPPI
DDX47 TCTN2 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
DDX47 TCTN3 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
DDX47 CEP290 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
DDX47 CEP128 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
DDX47 CEP164 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
DDX47 RPGRIP1L 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
DDX47 POC5 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
DDX47 TCTN1 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
DDX47 NOL10 25348397 N/A physical interaction ComPPI
DDX47 MCM9 25348397 N/A physical interaction ComPPI
HSCB DDX47 24234451 25348397 28380382 association anti bait coimmunoprecipitation ComPPI,IntAct

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