Gene Information gene info

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GENE：PDCD5

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol PDCD5
FullNmae programmed cell death 5
LocusType gene with protein product
Status Approved
HGNC_id HGNC:8764
EnsembleID ENSG00000105185
Uniprot O14737

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
PDCD5 pyroptosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
PDCD5 autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
PDCD5 apoptosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
PDCD5 apoptosis 36341760 The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns. regulator signature

Go Annotation:

GeneSymbol Go id
PDCD5 GO:0003677,GO:0005515,GO:0005634,GO:0005634,GO:0005737,GO:0005829,GO:0006915,GO:0008201,GO:0008285,GO:0010628,GO:0010698,GO:0043065,GO:0043280,GO:0048487,GO:0070062,GO:0071560,GO:0090200,GO:1903638,GO:1903645

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 PDCD5 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
PRDM14 PDCD5 18971253 20953172 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 PDCD5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF PDCD5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 PDCD5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 PDCD5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 PDCD5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A PDCD5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
KLF9 PDCD5 24173774 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00003D5391 PDCD5 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000021D7C8 PDCD5 23622248 25416803 mrna cleavage,inhibition clash TarBase

Source Target Pmid Interactiontype Methods Database
CSNK2A1 PDCD5 22135298 phosphorylation N/A PhosphoSite

Source Target Pmid Interactiontype Methods Database
EIF1B PDCD5 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
LMNA PDCD5 25348397 N/A physical interaction ComPPI
CETN2 PDCD5 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
PICK1 PDCD5 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
ACP5 PDCD5 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
TUBG1 PDCD5 24234451 25348397 29568061 association pull down,physical interaction ComPPI,IntAct
RAD18 PDCD5 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
TNIK PDCD5 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
MDM2 PDCD5 25348397 N/A physical interaction ComPPI
ATP1B1 PDCD5 25348397 N/A physical interaction ComPPI
TUBA1A PDCD5 24234451 25348397 29568061 association pull down ComPPI,IntAct
VHL PDCD5 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
UTP14A PDCD5 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
CEP126 PDCD5 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach ComPPI,IntAct
UBE2D3 PDCD5 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
YAF2 PDCD5 25348397 N/A physical interaction ComPPI
LRIF1 PDCD5 14525934 16169070 25348397 N/A two hybrid,physical interaction,two hybrid ComPPI,HPRD
RIF1 PDCD5 16169070 24234451 25348397 physical association two hybrid pooling approach,two hybrid fragment pooling approach ComPPI,IntAct
KDM1A PDCD5 23455924 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
STMN1 PDCD5 25348397 N/A physical interaction ComPPI
FBXW8 PDCD5 25348397 N/A anti tag coimmunoprecipitation,physical interaction,physical interaction ComPPI
EEF1G PDCD5 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
IKBKE PDCD5 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
TCEAL1 PDCD5 19615732 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
KAT5 PDCD5 14525934 16169070 19308289 24234451 25348397 27898060 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct,OmniPath
PDCD5 NUDT3 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
PDCD5 TP53 25348397 N/A physical interaction ComPPI
PDCD5 FN1 19738201 24234451 25348397 association cross-linking study,physical interaction ComPPI,IntAct
PDCD5 EEF1AKMT3 25348397 N/A physical interaction ComPPI
PDCD5 OTUD5 25348397 N/A physical interaction ComPPI
PDCD5 ARRDC5 25348397 N/A physical interaction ComPPI
PDCD5 MCC 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
PDCD5 HLA-B 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
PDCD5 OTUB1 24234451 25348397 26752685 association anti tag coimmunoprecipitation ComPPI,IntAct
PDCD5 PHOSPHO1 24234451 25348397 28330616 association pull down ComPPI,IntAct
CSNK2A1 PDCD5 19616514 26077467 27898060 stimulant N/A OmniPath

Visualization










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