Gene Information gene info

  1. Home

GENE：RNF34

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol RNF34
FullNmae ring finger protein 34
LocusType gene with protein product
Status Approved
HGNC_id HGNC:17297
EnsembleID ENSG00000170633
Uniprot Q969K3

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
RNF34 apoptosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
RNF34 apoptosis 36341760 The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns. regulator signature

Go Annotation:

GeneSymbol Go id
RNF34 GO:0002039,GO:0005515,GO:0005634,GO:0005654,GO:0005654,GO:0005737,GO:0005737,GO:0005829,GO:0005886,GO:0005886,GO:0006511,GO:0006915,GO:0012505,GO:0016567,GO:0016567,GO:0016604,GO:0016607,GO:0031625,GO:0035872,GO:0043161,GO:0043161,GO:0043161,GO:0046872,GO:0061630,GO:0061630,GO:0061630,GO:0061630,GO:0070417,GO:0070936,GO:0070936,GO:1901796,GO:1901797,GO:1901981,GO:1902042,GO:1902042,GO:2000374,GO:2001271,GO:2001271

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
E2F4 RNF34 17531812 18971253 trascriptional regulation,stimulation chromatin immunoprecipitation array,inferred by curator TFlink
ETS1 RNF34 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA2 RNF34 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA3 RNF34 21878914 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 RNF34 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA RNF34 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 RNF34 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS RNF34 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00000DDD35 RNF34 20371350 23313552 25416803 mrna cleavage,inhibition nucleotide sequence identification,clip TarBase
URS00002152A8 RNF34 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000075AB14 RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS000016FD1A RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS000021D7C8 RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS0000021D08 RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS00002FB065 RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS0000508C13 RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS000041E949 RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS000027080C RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS0000346991 RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS0000070CD2 RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS0000298BA3 RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS00002B3783 RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS0000042E1F RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS00002075FA RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS00000600E6 RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS000039E1E1 RNF34 23313552 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
DNAJA3 RNF34 25361965 interaction type N/A PTMCode2
RNF34 DNAJA3 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
HSPA8 RNF34 25348397 N/A physical interaction ComPPI
HSPA2 RNF34 25348397 N/A physical interaction ComPPI
SH3KBP1 RNF34 25348397 N/A physical interaction ComPPI
CASP9 RNF34 25348397 N/A physical interaction ComPPI
APPBP2 RNF34 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
UNC119 RNF34 25348397 N/A physical interaction ComPPI
FZR1 RNF34 25348397 N/A physical interaction ComPPI
UBE2D2 RNF34 25348397 N/A physical interaction ComPPI
PPARGC1A RNF34 25348397 N/A physical interaction ComPPI
UBE2N RNF34 24234451 25260751 25348397 ubiquitination reaction ubiquitinase assay ComPPI,IntAct
SERPINB13 RNF34 25348397 N/A physical interaction ComPPI
CASP8 RNF34 15069192 24234451 25348397 physical association anti tag coimmunoprecipitation,two hybrid,physical interaction ComPPI,IntAct
DNAJA3 RNF34 12118383 14525934 25348397 27898060 N/A two hybrid,physical interaction,two hybrid ComPPI,HPRD,OmniPath
TRIM23 RNF34 22493164 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
CDC20 RNF34 25348397 N/A physical interaction ComPPI
CASP10 RNF34 15069192 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
UBA1 RNF34 24234451 25260751 25348397 ubiquitination reaction ubiquitinase assay ComPPI,IntAct
TRIM25 RNF34 25348397 N/A physical interaction ComPPI
NOD1 RNF34 25012219 25348397 27898060 N/A physical interaction ComPPI,OmniPath
UBE2H RNF34 19549727 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
UBE2V1 RNF34 24234451 25260751 25348397 ubiquitination reaction ubiquitinase assay ComPPI,IntAct
ANAPC2 RNF34 25348397 N/A physical interaction ComPPI
RNF34 UBE2F 19549727 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
RNF34 TP53 25348397 N/A physical interaction ComPPI
RNF34 APP 25348397 N/A physical interaction ComPPI
RNF34 PHF7 22493164 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
RNF34 RFFL 25348397 N/A physical interaction ComPPI
RNF34 UNC119B 25348397 N/A physical interaction ComPPI
RNF34 EFCAB7 25348397 N/A physical interaction ComPPI
RNF34 KLHL15 25348397 N/A physical interaction ComPPI
RNF34 MANSC1 25348397 N/A physical interaction ComPPI
RNF34 TSR3 25348397 N/A physical interaction ComPPI

Visualization










  Return