GeneInfo:
GeneAttribute
GeneDescription
GeneSymbol
TMBIM1
FullNmae
transmembrane BAX inhibitor motif containing 1
LocusType
gene with protein product
Status
Approved
HGNC_id
HGNC:23410
EnsembleID
ENSG00000135926
Uniprot
Q969X1
Protein Structure:
Gene Description in Publicaton:
GeneSymbol
CellDeathType
PMID
Description
GeneType
TMBIM1
immunogenic
38538696
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore)
retulator signature
TMBIM1
apoptosis
38538696
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore)
retulator signature
TMBIM1
apoptosis
36341760
The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns.
regulator signature
Go Annotation:
GeneSymbol
Go id
TMBIM1
GO:0005123,GO:0005515,GO:0005765,GO:0005765,GO:0005783,GO:0005794,GO:0005794,GO:0005886,GO:0010008,GO:0016020,GO:0035579,GO:0043086,GO:0043231,GO:0070062,GO:1902042,GO:1902045,GO:1903077,GO:2000504,GO:2001234
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source
Target
Pmid
Interactiontype
Methods
Database
E2F4
TMBIM1
17531812
trascriptional regulation,stimulation
chromatin immunoprecipitation array
TFlink
ETS1
TMBIM1
18971253
20019798
trascriptional regulation,stimulation
inferred by curator,chromatin immunoprecipitation assay
TFlink
GATA1
TMBIM1
19941826
trascriptional regulation,stimulation
chromatin immunoprecipitation assay
TFlink
GATA2
TMBIM1
18971253
19941826
trascriptional regulation,stimulation
inferred by curator,chromatin immunoprecipitation assay
TFlink
YBX1
TMBIM1
19151767
trascriptional regulation,stimulation
chromatin immunoprecipitation assay
TFlink
FOXP3
TMBIM1
20554955
trascriptional regulation,stimulation
chromatin immunoprecipitation array
TFlink
SMARCA4
TMBIM1
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
CTCF
TMBIM1
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
E2F1
TMBIM1
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
HNF4A
TMBIM1
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
MITF
TMBIM1
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
SPI1
TMBIM1
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
TAL1
TMBIM1
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
Source
Target
Pmid
Interactiontype
Methods
Database
URS00000AA464
TMBIM1
23622248
25416803
mrna cleavage,inhibition
clash
TarBase
Source
Target
Pmid
Interactiontype
Methods
Database
BIK
TMBIM1
24234451
25348397
physical association
two hybrid,two hybrid array,two hybrid prey pooling approach
ComPPI,IntAct
EGFR
TMBIM1
25348397
N/A
physical interaction
ComPPI
RCHY1
TMBIM1
21988832
24234451
25348397
physical association
two hybrid,physical interaction
ComPPI,IntAct
SOCS5
TMBIM1
21988832
24234451
25348397
physical association
two hybrid,physical interaction
ComPPI,IntAct
SRPRB
TMBIM1
25348397
N/A
physical interaction
ComPPI
CD33
TMBIM1
24234451
25348397
physical association
two hybrid,two hybrid array,two hybrid prey pooling approach
ComPPI,IntAct
NXF1
TMBIM1
25348397
N/A
physical interaction
ComPPI
MOV10
TMBIM1
25348397
N/A
physical interaction
ComPPI
F2RL1
TMBIM1
24234451
28298427
physical association
ubiquitin reconstruction
IntAct
Visualization