GENE:TMBIM6
GeneInfo:
GeneAttribute | GeneDescription |
---|---|
GeneSymbol | TMBIM6 |
FullNmae | transmembrane BAX inhibitor motif containing 6 |
LocusType | gene with protein product |
Status | Approved |
HGNC_id | HGNC:11723 |
EnsembleID | ENSG00000139644 |
Uniprot | P55061 |
Protein Structure:
Gene Description in Publicaton:
GeneSymbol | CellDeathType | PMID | Description | GeneType |
---|---|---|---|---|
TMBIM6 | immunogenic | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
TMBIM6 | apoptosis | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
TMBIM6 | apoptosis | 36341760 | The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns. | regulator signature |
Go Annotation:
GeneSymbol | Go id |
---|---|
TMBIM6 | GO:0002638,GO:0005515,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0005886,GO:0006914,GO:0010523,GO:0016020,GO:0016020,GO:0019899,GO:0019899,GO:0031625,GO:0031966,GO:0031966,GO:0032091,GO:0032469,GO:0033119,GO:0033119,GO:0034620,GO:0034620,GO:0036483,GO:0043066,GO:0060698,GO:0060702,GO:0060702,GO:1902065,GO:1902236,GO:1903298,GO:1990441,GO:2001234,GO:2001234 |
KEGG Annotation:
GeneSymbol | GeneID | Pathway | Pathway Name |
---|---|---|---|
TMBIM6 | hsa:7009 | path:hsa05130 | Pathogenic Escherichia coli infection - Homo sapiens (human) |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source | Target | Pmid | Interactiontype | Methods | Database |
---|---|---|---|---|---|
BCL2 | TMBIM6 | 11704864 17446862 22039431 23064052 23377657 23430059 23850759 26192618 8929532 9660918 | association | N/A | ACSN |
TMBIM6 | TP63 | 21072181 23180781 | physical association | anti tag coimmunoprecipitation | InnateDB |
TMBIM6 | CEBPD | 21072181 23180781 | physical association | anti tag coimmunoprecipitation | InnateDB |
Source | Target | Pmid | Interactiontype | Methods | Database |
---|---|---|---|---|---|
ETS1 | TMBIM6 | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
PRDM14 | TMBIM6 | 20953172 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
SMARCA4 | TMBIM6 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
CEBPA | TMBIM6 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
CTCF | TMBIM6 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
E2F1 | TMBIM6 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
E2F4 | TMBIM6 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
EGR1 | TMBIM6 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
FOXP1 | TMBIM6 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
FOS | TMBIM6 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
HNF4A | TMBIM6 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
RUNX1 | TMBIM6 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
Source | Target | Pmid | Interactiontype | Methods | Database |
---|---|---|---|---|---|
URS0000338542 | TMBIM6 | 18668040 25416803 | mrna cleavage,inhibition | experimental interaction detection | TarBase |
URS00005651EE | TMBIM6 | 23622248 25416803 | mrna cleavage,inhibition | clash | TarBase |
URS000021D7C8 | TMBIM6 | 23622248 25416803 | mrna cleavage,inhibition | clash | TarBase |
URS00002075FA | TMBIM6 | 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS0000042E1F | TMBIM6 | 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00000DDD35 | TMBIM6 | 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00000600E6 | TMBIM6 | 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00002B3783 | TMBIM6 | 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS0000298BA3 | TMBIM6 | 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00001B341F | TMBIM6 | 20371350 22473208 23446348 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS0000330617 | TMBIM6 | 20371350 22473208 23446348 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS00002E92A8 | TMBIM6 | 20371350 23446348 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS000006FDD4 | TMBIM6 | 22473208 23446348 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00000B989F | TMBIM6 | 23446348 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00000BE495 | TMBIM6 | 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS000049FAE8 | TMBIM6 | 23446348 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00005ACA7C | TMBIM6 | 23446348 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00005F9738 | TMBIM6 | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS0000585553 | TMBIM6 | 23446348 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS0000195F5B | TMBIM6 | 23446348 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS0000085F64 | TMBIM6 | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS0000237AF9 | TMBIM6 | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00003E5ECC | TMBIM6 | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00004214BB | TMBIM6 | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS0000192A75 | TMBIM6 | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS000075AB0E | TMBIM6 | 20371350 23446348 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS000008C563 | TMBIM6 | 20371350 23446348 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS000019D79B | TMBIM6 | 20371350 21572407 23446348 24398324 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS000037E170 | TMBIM6 | 20371350 21572407 23446348 24398324 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS000025EABA | TMBIM6 | 20371350 21572407 23446348 24398324 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS000006372A | TMBIM6 | 23592263 25416803 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS00000753AD | TMBIM6 | 23592263 25416803 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS000049704B | TMBIM6 | 23592263 25416803 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS00000C4DB5 | TMBIM6 | 23592263 25416803 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS000010BD8D | TMBIM6 | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS0000009265 | TMBIM6 | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS000058863C | TMBIM6 | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00003FBC84 | TMBIM6 | 23592263 25416803 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS0000065FDF | TMBIM6 | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00002ECEE4 | TMBIM6 | 23446348 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS000043D2C1 | TMBIM6 | 23446348 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00004BC299 | TMBIM6 | 23446348 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00001EE123 | TMBIM6 | 20371350 21572407 23446348 24398324 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00004F24A9 | TMBIM6 | 20371350 21572407 23446348 24398324 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS000028DE3F | TMBIM6 | 20371350 23446348 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS0000321A1A | TMBIM6 | 20371350 23446348 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS000013ABA3 | TMBIM6 | 20371350 23446348 25416803 26701625 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS0000202460 | TMBIM6 | 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
URS00000821E0 | TMBIM6 | 25416803 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS0000083D87 | TMBIM6 | 25416803 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS00000EBD4B | TMBIM6 | 25416803 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS0000209F04 | TMBIM6 | 25416803 27292025 | mrna cleavage,inhibition | clip | TarBase |
URS0000425000 | TMBIM6 | 25416803 27292025 | mrna cleavage,inhibition | clip | TarBase |
Source | Target | Pmid | Interactiontype | Methods | Database |
---|---|---|---|---|---|
TRAF6 | TMBIM6 | 17353931 24234451 25348397 | physical association | anti bait coimmunoprecipitation | ComPPI,IntAct |
GLP1R | TMBIM6 | 25348397 | N/A | physical interaction | ComPPI |
KEAP1 | TMBIM6 | 25348397 | N/A | physical interaction | ComPPI |
BCL2L1 | TMBIM6 | 14525934 25348397 9660918 | N/A | experimental interaction detection,in vivo | ComPPI,HPRD |
SLC7A1 | TMBIM6 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
SIT1 | TMBIM6 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
SLAMF6 | TMBIM6 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TREML1 | TMBIM6 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
CD247 | TMBIM6 | 24234451 24502978 25348397 | association | pull down | ComPPI,IntAct |
IER3 | TMBIM6 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
MAPK6 | TMBIM6 | 24234451 25348397 26972000 | association | anti tag coimmunoprecipitation | ComPPI,IntAct |
TNFRSF17 | TMBIM6 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
CHRND | TMBIM6 | 25348397 | N/A | physical interaction | ComPPI |
CERS2 | TMBIM6 | 21988832 24234451 25348397 | physical association | two hybrid,physical interaction | ComPPI,IntAct |
BCL2 | TMBIM6 | 14525934 25348397 9660918 | N/A | experimental interaction detection,physical interaction,in vivo | ComPPI,HPRD |
EBP | TMBIM6 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
HTR2C | TMBIM6 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | BFAR | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | VTI1A | 21988832 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid array | ComPPI,IntAct |
TMBIM6 | HSD11B1 | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | POMK | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | SERINC2 | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | CLEC5A | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | ADAM33 | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | KIAA2013 | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | ODF4 | 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | ASIC4 | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | SPPL2B | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | RNF185 | 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | C5ORF46 | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | CLCC1 | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | TMCO3 | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | MPPE1 | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | IL17RC | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | TRPM8 | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | ATG9A | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | ST8SIA4 | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | TMEM63A | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | RNF170 | 25348397 | N/A | physical interaction | ComPPI |
TMBIM6 | HERPUD2 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | MS4A3 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | GJA5 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | JSRP1 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | CREB3L1 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | MFSD14B | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | FGFBP2 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | MMGT1 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | PI16 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | STEAP1B | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | ADIPOR2 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | TMUB1 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | GPX8 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | KCNC1 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | SCN3B | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | SOAT2 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | UGT2B11 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | CDC7 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | FAM209A | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | KCNA10 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | ERP29 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | GPHB5 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | GZMK | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | GPR151 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | DMBX1 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | CLDN22 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | LRRC59 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | SLC41A3 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
MANBAL | TMBIM6 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
TMBIM6 | TMBIM6 | 14525934 9660918 | N/A | experimental interaction detection | HPRD |
Source | Target | Pmid | Interactiontype | Methods | Database |
---|---|---|---|---|---|
URS00009B700B | TMBIM6 | 27087310 | direct interaction,inhibition | N/A | NPInter |