GeneInfo:
GeneAttribute
GeneDescription
GeneSymbol
CCS
FullNmae
copper chaperone for superoxide dismutase
LocusType
gene with protein product
Status
Approved
HGNC_id
HGNC:1613
EnsembleID
ENSG00000173992
Uniprot
O14618
Protein Structure:
Gene Description in Publicaton:
GeneSymbol
CellDeathType
PMID
Description
GeneType
CCS
cuproptosis
36882769
Copper chaperone for superoxide dismutase(CCS) directly interacted with and transported copper ions to superoxide dismutase 1(SOD1) .
transported copper
CCS
cuproptosis
38339398
Copper Chaperone for Superoxide Dismutase (CCS):Forms heterodimers with copper–zinc superoxide dismutase
copper ionophores
CCS
cuproptosis
38495196
Cuproptosis-related genes were manually curated, and differentially expressed cuproptosis-related genes (DECuGs) were identified.Then, the 16 DECuGs were obtained by the intersection of the 5018 DEGs and 63 cuproptosis-related genes.
63 cuproptosis-related genes
CCS
cuproptosis
38348451
SOD1 is a copper-containing enzyme that clears superoxide radicals within the cell. CCS helps SOD1 in its proper folding and activity by providing copper ions. This is crucial for maintaining the redox balance within the cell and preventing oxidative damage.
CRGs in the cuproptosis pathway
CCS
cuproptosis
36313717
The details of ninety-six candidate cuproptosis-related genes involved in the copper homeostasis regulatory pathway, copper metabolism diseases, mitochondrial respiratory, and iron-sulfur cluster proteins were exhibited in Table S1.
Genes related to copper homeostasis pathway
CCS
cuproptosis
36211378
Forty-three cuproptosis-related genes were selected from the review of Chang et al. (13)
43 cuproptosis-related genes in the study
CCS
cuproptosis
36568423
Additionally, 41 cuproptosis regulators were obtained from the previous publications.
cuproptosis-related genes
CCS
cuproptosis
36505872
A total of 44 cuproptosis-related genes were extracted from known literature.
cuproptosis-related genes
Go Annotation:
GeneSymbol
Go id
CCS
GO:0005507,GO:0005507,GO:0005515,GO:0005634,GO:0005737,GO:0005829,GO:0006801,GO:0015035,GO:0015680,GO:0016532,GO:0019430,GO:0034599,GO:0045296
KEGG Annotation:
GeneSymbol
GeneID
Pathway
Pathway Name
CCS
hsa:9973
path:hsa05014
Amyotrophic lateral sclerosis - Homo sapiens (human)
CCS
hsa:9973
path:hsa05022
Pathways of neurodegeneration - multiple diseases - Homo sapiens (human)
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source
Target
Pmid
Interactiontype
Methods
Database
IL7R
CCS
20167604
23180781
physical association
anti tag coimmunoprecipitation
InnateDB
Source
Target
Pmid
Interactiontype
Methods
Database
GATA2
CCS
19941826
trascriptional regulation,stimulation
chromatin immunoprecipitation assay
TFlink
SMARCA4
CCS
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
CEBPA
CCS
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
CTCF
CCS
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
E2F1
CCS
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
E2F4
CCS
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
ETS1
CCS
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
HNF4A
CCS
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
MITF
CCS
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
SPI1
CCS
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
ZNF263
CCS
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
Source
Target
Pmid
Interactiontype
Methods
Database
URS00005651EE
CCS
23622248
25416803
mrna cleavage,inhibition
clash
TarBase
URS00000EC1BE
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00001481F9
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS000075BDAA
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS0000008A99
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS0000221168
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00003380CC
CCS
23824327
25416803
27292025
mrna cleavage,inhibition
clip
TarBase
URS00005CC20C
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS000075C4B1
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS000045147B
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS000005CE28
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00000EEF5F
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS000032FC1A
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00000C5BAA
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS0000215483
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00000AA464
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00004818BD
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS000003575B
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00004AC389
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS000016D2D4
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00005D986D
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS0000508C13
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS0000045DBD
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00005C1F22
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00002E0524
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00001FC26E
CCS
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00003E2232
CCS
21572407
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS000031B6ED
CCS
21572407
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS000016FD1A
CCS
23824327
25416803
27292025
mrna cleavage,inhibition
clip
TarBase
URS00000B0E50
CCS
23824327
25416803
27292025
mrna cleavage,inhibition
clip
TarBase
URS000075AB14
CCS
23313552
25416803
mrna cleavage,inhibition
clip
TarBase
URS00005586D0
CCS
23313552
25416803
mrna cleavage,inhibition
clip
TarBase
URS000072B4C8
CCS
21572407
25416803
mrna cleavage,inhibition
clip
TarBase
URS00003B59DF
CCS
21572407
25416803
mrna cleavage,inhibition
clip
TarBase
Source
Target
Pmid
Interactiontype
Methods
Database
YWHAG
CCS
14525934
15324660
25348397
N/A
experimental interaction detection,in vivo
ComPPI,HPRD
XIAP
CCS
25348397
N/A
physical interaction
ComPPI
CDH1
CCS
25348397
N/A
physical interaction
ComPPI
TXN
CCS
25348397
N/A
physical interaction
ComPPI
CUL4B
CCS
25348397
N/A
physical interaction
ComPPI
APBA1
CCS
11115513
14525934
25348397
27898060
N/A
experimental interaction detection,physical interaction,in vitro,in vivo
ComPPI,HPRD,OmniPath
ATOX1
CCS
25348397
N/A
physical interaction
ComPPI
RAE1
CCS
25348397
N/A
physical interaction
ComPPI
SOD1
CCS
10677207
12968035
14525934
24234451
25348397
9726962
physical association
experimental interaction detection,pull down,physical interaction,in vitro,in vivo
ComPPI,HPRD,IntAct
CCS
SLC31A1
25348397
N/A
physical interaction
ComPPI
CCS
CAPZA2
25348397
N/A
physical interaction
ComPPI
CCS
SCRN2
25348397
N/A
physical interaction
ComPPI
CCS
GMPPB
25348397
N/A
physical interaction
ComPPI
CCS
GOT1
25348397
N/A
physical interaction
ComPPI
CCS
PPIL3
25348397
N/A
physical interaction
ComPPI
CCS
DUSP13
25348397
N/A
physical interaction
ComPPI
CCS
DUSP13
25348397
N/A
physical interaction
ComPPI
CCS
CCS
10677207
14525934
N/A
experimental interaction detection
HPRD
CCS
APBA2
24234451
29578633
N/A
fluorescence polarization spectroscopy
IntAct
IL7R
CCS
20167604
27898060
N/A
N/A
OmniPath
Visualization