GENE:NRF1
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | NRF1 |
| FullNmae | nuclear respiratory factor 1 |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:7996 |
| EnsembleID | ENSG00000106459 |
| Uniprot | Q16656 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| NRF1 | autosis | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
| NRF1 | cuproptosis | 36010978 | Derived from the genome-wide CRISPR-Cas9 loss-of-function test reported in previous literature, 347 potential cuproptosis-related genes (FDR < 0.05) were identified, and for a detailed list of genes, see聽Supplementary Table S1. | Cuproptosis-related genes |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| NRF1 | GO:0000978,GO:0000978,GO:0000978,GO:0000981,GO:0001228,GO:0001228,GO:0005515,GO:0005634,GO:0005634,GO:0005654,GO:0005654,GO:0005829,GO:0006357,GO:0042803,GO:0045944,GO:0070062 |
KEGG Annotation:
| GeneSymbol | GeneID | Pathway | Pathway Name |
|---|---|---|---|
| NRF1 | hsa:4899 | path:hsa04371 | Apelin signaling pathway - Homo sapiens (human) |
| NRF1 | hsa:4899 | path:hsa05016 | Huntington disease - Homo sapiens (human) |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| ESR1 | NRF1 | 18048642 21486948 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| ESR2 | NRF1 | 18048642 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| ETS1 | NRF1 | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| GATA1 | NRF1 | 19941826 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| GATA2 | NRF1 | 19941826 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| SMARCA4 | NRF1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CEBPA | NRF1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CTCF | NRF1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| E2F1 | NRF1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EGR1 | NRF1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXA1 | NRF1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| HNF4A | NRF1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| MITF | NRF1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| SPI1 | NRF1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| ZNF263 | NRF1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CREB1 | NRF1 | 20587593 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| MEF2A | NRF1 | 18222924 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| NFKB1 | NRF1 | 20587593 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| RELA | NRF1 | 20587593 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS00003CF1AD | NRF1 | 23622248 25416803 | mrna cleavage,inhibition | clash | TarBase |
| URS0000411752 | NRF1 | 20371350 22012620 23592263 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS0000170D8B | NRF1 | 20371350 22012620 23592263 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00000C5969 | NRF1 | 20371350 22012620 23592263 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS000007F792 | NRF1 | 20371350 22012620 24398324 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS0000427B68 | NRF1 | 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000039607D | NRF1 | 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000006372A | NRF1 | 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00004719AB | NRF1 | 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000075A760 | NRF1 | 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00002152A8 | NRF1 | 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001C770D | NRF1 | 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000060AABB | NRF1 | 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000235862 | NRF1 | 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00005F1B8C | NRF1 | 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000075AB0E | NRF1 | 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000AB32B | NRF1 | 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00002578DA | NRF1 | 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000019D79B | NRF1 | 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000364FEF | NRF1 | 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001799A3 | NRF1 | 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000472A9B | NRF1 | 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000B7E30 | NRF1 | 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000028DE3F | NRF1 | 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00002CAE0C | NRF1 | 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001EE123 | NRF1 | 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000C5BAA | NRF1 | 21572407 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000075C3F6 | NRF1 | 22012620 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00000AF45F | NRF1 | 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000CBE63 | NRF1 | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000568FF8 | NRF1 | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000345DEB | NRF1 | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000821E0 | NRF1 | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000004203C | NRF1 | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00005CC20C | NRF1 | 25416803 26201446 | mrna cleavage,inhibition | western blot,quantitative reverse transcription pcr,miRNA interference luciferase reporter assay | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| NRF1 | PPRC1 | 25361965 | interaction type | N/A | PTMCode2 |
| PPRC1 | NRF1 | 25361965 | interaction type | N/A | PTMCode2 |
| NRF1 | MAFF | 25361965 | interaction type | N/A | PTMCode2 |
| MAFF | NRF1 | 25361965 | interaction type | N/A | PTMCode2 |
| NRF1 | NFE2L2 | 25361965 | interaction type | N/A | PTMCode2 |
| NFE2L2 | NRF1 | 25361965 | interaction type | N/A | PTMCode2 |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| DYNLL1 | NRF1 | 11069771 14525934 24234451 25348397 27173435 27898060 | association,physical association | two hybrid,experimental interaction detection,physical interaction,in vitro,in vivo,tandem affinity purification,inference by socio-affinity scoring,two hybrid | ComPPI,HPRD,IntAct,OmniPath |
| DYNLL2 | NRF1 | 24234451 25348397 27173435 | association,physical association | physical interaction,tandem affinity purification,inference by socio-affinity scoring | ComPPI,IntAct |
| CCND1 | NRF1 | 16864783 24234451 25348397 | physical association | anti tag coimmunoprecipitation,two hybrid,physical interaction | ComPPI,IntAct |
| SP4 | NRF1 | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| FHL2 | NRF1 | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| CEBPB | NRF1 | 25348397 | N/A | physical interaction | ComPPI |
| MAFF | NRF1 | 12490281 14525934 25348397 | N/A | experimental interaction detection,physical interaction,in vitro | ComPPI,HPRD |
| PPARGC1A | NRF1 | 10412986 11943463 14525934 25348397 | N/A | experimental interaction detection,physical interaction,in vitro,in vivo | ComPPI,HPRD |
| PARP1 | NRF1 | 25348397 | N/A | physical interaction | ComPPI |
| CSNK2A1 | NRF1 | 23816881 25348397 27898060 | N/A | physical interaction | ComPPI,OmniPath |
| HNRNPL | NRF1 | 25348397 | N/A | physical interaction | ComPPI |
| TRAF2 | NRF1 | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| POGZ | NRF1 | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| NRF1 | PPRC1 | 11340167 11943463 14525934 25348397 27898060 | N/A | experimental interaction detection,physical interaction,in vitro,in vivo | ComPPI,HPRD,OmniPath |
| NRF1 | CSNK2B | 25348397 | N/A | physical interaction | ComPPI |
| NRF1 | PLXDC1 | 25348397 | N/A | physical interaction | ComPPI |
| NRF1 | FOXJ2 | 24234451 25348397 25609649 | association | physical interaction,tandem affinity purification | ComPPI,IntAct |
| NRF1 | FOXK2 | 24234451 25348397 25609649 | association | physical interaction,tandem affinity purification | ComPPI,IntAct |
| NRF1 | FOXP3 | 24234451 25348397 25609649 | association | physical interaction,tandem affinity purification | ComPPI,IntAct |
| NRF1 | WDR59 | 25348397 | N/A | physical interaction | ComPPI |
| NRF1 | SIRT7 | 24234451 25348397 25792330 | physical association | anti bait coimmunoprecipitation,anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| MKI67 | NRF1 | 24234451 26949251 | association | anti tag coimmunoprecipitation | IntAct |
| NRF1 | EIF2S1 | 16230352 27898060 | stimulant | N/A | OmniPath |
| JUND | NRF1 | 27898060 9872330 | N/A | N/A | OmniPath |
| AKT1 | NRF1 | 16230352 27898060 | stimulant | N/A | OmniPath |
| NRF1 | TFAM | 16230352 27898060 | stimulant | N/A | OmniPath |
| JUNB | NRF1 | 27898060 9872330 | N/A | N/A | OmniPath |
| NRF1 | EIF2S2 | 16230352 27898060 | stimulant | N/A | OmniPath |
| JUN | NRF1 | 27898060 9872330 | N/A | N/A | OmniPath |
