GeneInfo:
GeneAttribute
GeneDescription
GeneSymbol
RPUSD3
FullNmae
RNA pseudouridine synthase D3
LocusType
gene with protein product
Status
Approved
HGNC_id
HGNC:28437
EnsembleID
ENSG00000156990
Uniprot
Q6P087
Protein Structure:
Gene Description in Publicaton:
GeneSymbol
CellDeathType
PMID
Description
GeneType
RPUSD3
cuproptosis
36010978
Derived from the genome-wide CRISPR-Cas9 loss-of-function test reported in previous literature, 347 potential cuproptosis-related genes (FDR < 0.05) were identified, and for a detailed list of genes, see聽Supplementary Table S1.
Cuproptosis-related genes
Go Annotation:
GeneSymbol
Go id
RPUSD3
GO:0001522,GO:0003723,GO:0005515,GO:0005739,GO:0005759,GO:0006397,GO:0009982,GO:0035770,GO:0070131
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source
Target
Pmid
Interactiontype
Methods
Database
ETS1
RPUSD3
18971253
20019798
trascriptional regulation,stimulation
inferred by curator,chromatin immunoprecipitation assay
TFlink
GATA2
RPUSD3
19941826
trascriptional regulation,stimulation
chromatin immunoprecipitation assay
TFlink
E2F4
RPUSD3
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
FOS
RPUSD3
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
Source
Target
Pmid
Interactiontype
Methods
Database
URS00001C3AC1
RPUSD3
23622248
25416803
mrna cleavage,inhibition
clash
TarBase
Source
Target
Pmid
Interactiontype
Methods
Database
ZNRD2
RPUSD3
25348397
N/A
physical interaction
ComPPI
ANXA1
RPUSD3
25348397
N/A
physical interaction
ComPPI
KRTAP10-7
RPUSD3
24234451
25348397
25416956
physical association
physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid
ComPPI,IntAct
KRT31
RPUSD3
24234451
25348397
25416956
physical association
physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid
ComPPI,IntAct
OLFM4
RPUSD3
25348397
N/A
physical interaction
ComPPI
JUN
RPUSD3
24234451
25348397
25609649
association
anti bait coimmunoprecipitation
ComPPI,IntAct
PLAUR
RPUSD3
25348397
N/A
physical interaction
ComPPI
LRP1
RPUSD3
25348397
N/A
physical interaction
ComPPI
CLK1
RPUSD3
25348397
N/A
physical interaction
ComPPI
RBM42
RPUSD3
25348397
N/A
physical interaction
ComPPI
FBXW11
RPUSD3
25348397
N/A
physical interaction
ComPPI
NUP107
RPUSD3
24234451
25348397
26496610
association
anti tag coimmunoprecipitation,physical interaction
ComPPI,IntAct
HSPD1
RPUSD3
25348397
N/A
physical interaction
ComPPI
HNRNPA1
RPUSD3
25348397
N/A
physical interaction
ComPPI
EMILIN1
RPUSD3
25348397
N/A
physical interaction
ComPPI
MRPL4
RPUSD3
25348397
N/A
physical interaction
ComPPI
ATPAF1
RPUSD3
25348397
N/A
physical interaction
ComPPI
RPUSD3
KRTAP10-3
25348397
N/A
physical interaction
ComPPI
Visualization