GENE:U2SURP
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | U2SURP |
| FullNmae | U2 snRNP associated SURP domain containing |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:30855 |
| EnsembleID | ENSG00000163714 |
| Uniprot | O15042 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| U2SURP | immunogenic | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
| U2SURP | cuproptosis | 36010978 | Derived from the genome-wide CRISPR-Cas9 loss-of-function test reported in previous literature, 347 potential cuproptosis-related genes (FDR < 0.05) were identified, and for a detailed list of genes, see聽Supplementary Table S1. | Cuproptosis-related genes |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| U2SURP | GO:0003723,GO:0003723,GO:0005515,GO:0005634,GO:0005634,GO:0005654,GO:0005654,GO:0006396 |
KEGG Annotation:
| GeneSymbol | GeneID | Pathway | Pathway Name |
|---|---|---|---|
| U2SURP | hsa:23350 | path:hsa03040 | Spliceosome - Homo sapiens (human) |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| AR | U2SURP | 20610535 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| ETS1 | U2SURP | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| MYC | U2SURP | 12747840 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| TFAP2C | U2SURP | 20629094 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| SMARCA4 | U2SURP | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CEBPA | U2SURP | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CTCF | U2SURP | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| E2F4 | U2SURP | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXA1 | U2SURP | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXP1 | U2SURP | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOS | U2SURP | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| HNF4A | U2SURP | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| MITF | U2SURP | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS00000CF1D2 | U2SURP | 20371350 25416803 | mrna cleavage,inhibition | nucleotide sequence identification | TarBase |
| URS0000272A3D | U2SURP | 20371350 25416803 | mrna cleavage,inhibition | nucleotide sequence identification | TarBase |
| URS00000EED18 | U2SURP | 21566225 25416803 | mrna cleavage,inhibition | experimental interaction detection | TarBase |
| URS00002075FA | U2SURP | 20371350 21572407 22012620 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000042E1F | U2SURP | 20371350 21572407 22012620 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000DDD35 | U2SURP | 20371350 21572407 22012620 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000039E1E1 | U2SURP | 20371350 21572407 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001E0AEA | U2SURP | 20371350 21572407 22012620 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000600E6 | U2SURP | 20371350 21572407 22012620 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000007FBA | U2SURP | 20371350 21572407 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00002B3783 | U2SURP | 20371350 21572407 22012620 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000037D7E5 | U2SURP | 20371350 21572407 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00003883FE | U2SURP | 20371350 21572407 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000298BA3 | U2SURP | 20371350 21572407 22012620 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000023133F | U2SURP | 21572407 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000171CD1 | U2SURP | 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000041CB9C | U2SURP | 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000040EE1D | U2SURP | 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001B341F | U2SURP | 20371350 21572407 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00002367FA | U2SURP | 21572407 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00003EB4CF | U2SURP | 21572407 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00004F24A9 | U2SURP | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000029D793 | U2SURP | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000025EABA | U2SURP | 20371350 21572407 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000006F90B | U2SURP | 20371350 21572407 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000D2680 | U2SURP | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000015188E | U2SURP | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00002CE0C6 | U2SURP | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| MFAP1 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| SNW1 | U2SURP | 20467437 24234451 25348397 | association | anti bait coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| RBM17 | U2SURP | 22365833 24234451 25348397 | physical association | two hybrid,physical interaction | ComPPI,IntAct |
| CDC5L | U2SURP | 20467437 24234451 25348397 | association | anti bait coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| CD2BP2 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| LMNA | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| SF3A2 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| JUN | U2SURP | 24234451 25348397 25609649 | association | anti bait coimmunoprecipitation | ComPPI,IntAct |
| COPS5 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| FGFR2 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| U2AF2 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| PAXIP1 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| CUL3 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| NTRK1 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| PRPF40A | U2SURP | 22365833 24234451 25348397 | physical association | two hybrid,physical interaction | ComPPI,IntAct |
| RPA1 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| MYC | U2SURP | 17314511 24234451 25348397 | association | physical interaction,tandem affinity purification | ComPPI,IntAct |
| TERT | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| RBM10 | U2SURP | 22365833 24234451 25348397 | physical association | anti tag coimmunoprecipitation,two hybrid,physical interaction | ComPPI,IntAct |
| GRK5 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| RPA2 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| RPA3 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| CUL1 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| MED9 | U2SURP | 15175163 24234451 25348397 | association | anti tag coimmunoprecipitation | ComPPI,IntAct |
| SF3A1 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| DROSHA | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| GABARAP | U2SURP | 20562859 24234451 25348397 | association | anti tag coimmunoprecipitation | ComPPI,IntAct |
| WWOX | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| MDC1 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| ZRSR2 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| SF1 | U2SURP | 24234451 25348397 26420826 | association | anti bait coimmunoprecipitation | ComPPI,IntAct |
| CUL7 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| H3C1 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| CAND1 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| BARD1 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| ESR1 | U2SURP | 21182205 24234451 25348397 | association | cosedimentation through density gradient,physical interaction | ComPPI,IntAct |
| TRA2A | U2SURP | 22365833 24234451 25348397 | physical association | two hybrid,physical interaction | ComPPI,IntAct |
| TBC1D4 | U2SURP | 12421765 24234451 25348397 | physical association | two hybrid,physical interaction | ComPPI,IntAct |
| TARDBP | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| MED19 | U2SURP | 15175163 24234451 25348397 | association | anti tag coimmunoprecipitation | ComPPI,IntAct |
| RPSA | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| SNRPE | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| MYO1C | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| RPS2 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| CYLD | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| CTNNBL1 | U2SURP | 22365833 24234451 25348397 | physical association | two hybrid,physical interaction | ComPPI,IntAct |
| GABARAPL1 | U2SURP | 20562859 24234451 25348397 | association | anti tag coimmunoprecipitation | ComPPI,IntAct |
| RBM5 | U2SURP | 22365833 24234451 25348397 | physical association | anti tag coimmunoprecipitation,two hybrid,physical interaction | ComPPI,IntAct |
| SIRT7 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| DDX42 | U2SURP | 22365833 24234451 25348397 | physical association | two hybrid,physical interaction | ComPPI,IntAct |
| PLOD1 | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| DDX41 | U2SURP | 24234451 25348397 25920683 | association | anti tag coimmunoprecipitation | ComPPI,IntAct |
| NCL | U2SURP | 25348397 | N/A | physical interaction | ComPPI |
| U2SURP | OBSL1 | 25348397 | N/A | physical interaction | ComPPI |
| U2SURP | RPS8 | 25348397 | N/A | physical interaction | ComPPI |
| U2SURP | CHERP | 24234451 25348397 30021884 | physical association | cross-linking study,physical interaction | ComPPI,IntAct |
| U2SURP | JMJD6 | 25348397 | N/A | physical interaction | ComPPI |
| U2SURP | DCLRE1A | 24234451 30021884 | physical association | cross-linking study | IntAct |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS00009B7CF7 | U2SURP | 27087310 | direct interaction,inhibition | N/A | NPInter |
