GENE:IFNG
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | IFNG |
| FullNmae | interferon gamma |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:5438 |
| EnsembleID | ENSG00000111537 |
| Uniprot | P01579 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| IFNG | necroptosis | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
| IFNG | necroptosis | 36341760 | The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns. | regulator signature |
| IFNG | immunogenic | 37275552 | To identify genes associated with ICD, we collected 34 ICD-related genes from previously reported literature. | retulator signature |
| IFNG | ferroptosis | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
| IFNG | autophagy | 25426782 | Actually, blockage of Mtb-Ag-induced IFNG markedly reduced autophagy in HR patients whereas addition of limited amounts of IFNG significantly increased autophagy in LR patients. | retulator signature |
| IFNG | autophagy | 36341760 | The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns. | regulator signature |
| IFNG | apoptosis | 25619828 | In vitro, knockdown endogenous or IFNg-induced Irgm1 significantly decreases the proliferation and increases apoptosis of B16 cells. | retulator signature |
| IFNG | apoptosis | 36341760 | The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns. | regulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| IFNG | GO:0000122,GO:0001774,GO:0001774,GO:0001819,GO:0002250,GO:0002281,GO:0005125,GO:0005125,GO:0005133,GO:0005515,GO:0005576,GO:0005576,GO:0005615,GO:0005615,GO:0006915,GO:0006959,GO:0007166,GO:0007259,GO:0008284,GO:0009615,GO:0010508,GO:0010628,GO:0010628,GO:0010628,GO:0010628,GO:0010628,GO:0010629,GO:0010629,GO:0010634,GO:0030225,GO:0030857,GO:0031334,GO:0032700,GO:0032722,GO:0032731,GO:0032735,GO:0032747,GO:0032755,GO:0032760,GO:0032834,GO:0033141,GO:0033141,GO:0034393,GO:0038196,GO:0042307,GO:0042531,GO:0045348,GO:0045429,GO:0045672,GO:0045821,GO:0045892,GO:0048143,GO:0048143,GO:0048662,GO:0050729,GO:0050766,GO:0050769,GO:0050796,GO:0051044,GO:0051173,GO:0051607,GO:0051712,GO:0051770,GO:0060333,GO:0060333,GO:0060550,GO:0060552,GO:0060557,GO:0060559,GO:0071902,GO:0090312,GO:0097191,GO:0098586,GO:0150076,GO:1900222,GO:1901857,GO:1902004,GO:1902004,GO:1902948,GO:1903078,GO:1903543,GO:1904440,GO:1904783,GO:1904798,GO:2000273,GO:2000309 |
KEGG Annotation:
| GeneSymbol | GeneID | Pathway | Pathway Name |
|---|---|---|---|
| IFNG | hsa:3458 | path:hsa03050 | Proteasome - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa04060 | Cytokine-cytokine receptor interaction - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa04066 | HIF-1 signaling pathway - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa04217 | Necroptosis - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa04350 | TGF-beta signaling pathway - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa04380 | Osteoclast differentiation - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa04612 | Antigen processing and presentation - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa04630 | JAK-STAT signaling pathway - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa04650 | Natural killer cell mediated cytotoxicity - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa04657 | IL-17 signaling pathway - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa04658 | Th1 and Th2 cell differentiation - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa04659 | Th17 cell differentiation - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa04660 | T cell receptor signaling pathway - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa04940 | Type I diabetes mellitus - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05140 | Leishmaniasis - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05142 | Chagas disease - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05143 | African trypanosomiasis - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05144 | Malaria - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05145 | Toxoplasmosis - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05146 | Amoebiasis - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05152 | Tuberculosis - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05160 | Hepatitis C - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05164 | Influenza A - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05168 | Herpes simplex virus 1 infection - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05200 | Pathways in cancer - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05235 | PD-L1 expression and PD-1 checkpoint pathway in cancer - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05321 | Inflammatory bowel disease - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05322 | Systemic lupus erythematosus - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05323 | Rheumatoid arthritis - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05330 | Allograft rejection - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05332 | Graft-versus-host disease - Homo sapiens (human) |
| IFNG | hsa:3458 | path:hsa05418 | Fluid shear stress and atherosclerosis - Homo sapiens (human) |
Protein-Protein Interaction(String):
Gene-Drug Network:
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| CREB1 | IFNG | 11907114 15879136 18641343 20006311 20685939 7759501 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay,electrophoretic mobility shift assay | TFlink |
| ATF2 | IFNG | 12836278 18641343 20006311 20304822 | trascriptional regulation,stimulation | inferred by curator,electrophoretic mobility shift assay | TFlink |
| ETS1 | IFNG | 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| GATA3 | IFNG | 21507199 8228802 | trascriptional regulation,stimulation | inferred by curator,electrophoretic mobility shift assay | TFlink |
| JUN | IFNG | 12626576 12836278 18641343 20006311 20304822 7759501 | trascriptional regulation,stimulation | inferred by curator,electrophoretic mobility shift assay | TFlink |
| NFKB1 | IFNG | 17407192 18690006 21243522 9374532 | trascriptional regulation,stimulation | inferred by curator,electrophoretic mobility shift assay | TFlink |
| REL | IFNG | 1542667 | trascriptional regulation,stimulation | inferred by curator,electrophoretic mobility shift assay | TFlink |
| RELA | IFNG | 17407192 18690006 21243522 9374532 | trascriptional regulation,stimulation | inferred by curator,electrophoretic mobility shift assay | TFlink |
| FOXP3 | IFNG | 20554955 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| SMARCA4 | IFNG | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CTCF | IFNG | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| E2F1 | IFNG | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXA1 | IFNG | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TP53 | IFNG | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| ATF3 | IFNG | 20304822 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EGR1 | IFNG | 8900159 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EOMES | IFNG | 20056084 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EP300 | IFNG | 12836278 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| GATA1 | IFNG | 12836278 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| IRF1 | IFNG | 13678429 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| MSC | IFNG | 19561533 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| MYCN | IFNG | 9570357 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| NFATC1 | IFNG | 12836278 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| NFATC2 | IFNG | 12836278 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| NFIL3 | IFNG | 7565758 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| PARP1 | IFNG | 17177976 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| PROX1 | IFNG | 20064070 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| RFX5 | IFNG | 12968017 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| STAT1 | IFNG | 13678429 15055356 16195385 18616672 20004484 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| STAT3 | IFNG | 18616672 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| STAT4 | IFNG | 9558063 9642277 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| STAT5A | IFNG | 15528362 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| STAT5B | IFNG | 15528362 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TBX21 | IFNG | 12938094 16498264 16737784 17541280 17705132 19348920 19879772 20056084 20977921 21507199 21540308 22521571 24752800 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TFAP4 | IFNG | 12836278 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| USF1 | IFNG | 8900159 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| YY1 | IFNG | 12836278 8756632 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TFAP2A | IFNG | N/A | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS0000171CD1 | IFNG | 22379033 | rna interference,inhibition | quantitative reverse transcription pcr,miRNA interference luciferase reporter assay | miRSponge |
| URS000041CB9C | IFNG | 22379033 | rna interference,inhibition | quantitative reverse transcription pcr,miRNA interference luciferase reporter assay | miRSponge |
| URS0000081E1F | IFNG | 23360331 | rna interference,inhibition | miRNA interference luciferase reporter assay | miRSponge |
| URS0000171CD1 | IFNG | 22379033 25416803 | mrna cleavage,inhibition | quantitative reverse transcription pcr,miRNA interference luciferase reporter assay | TarBase |
| URS000041CB9C | IFNG | 22379033 25416803 | mrna cleavage,inhibition | quantitative reverse transcription pcr,miRNA interference luciferase reporter assay | TarBase |
| URS0000081E1F | IFNG | 23360331 25416803 | mrna cleavage,inhibition | miRNA interference luciferase reporter assay | TarBase |
| URS000003ABC4 | IFNG | 19088304 25416803 | mrna cleavage,inhibition | array technology | TarBase |
| URS00001F0C23 | IFNG | 24759737 25416803 | mrna cleavage,inhibition | array technology,experimental interaction detection,experimental interaction detection,western blot,quantitative reverse transcription pcr | TarBase |
| URS00001B341F | IFNG | 24725595 25416803 | mrna cleavage,inhibition | western blot,chromatin immunoprecipitation assay,quantitative reverse transcription pcr,miRNA interference luciferase reporter assay | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| IFNG | IFNGR2 | 25361965 | interaction type | N/A | PTMCode2 |
| IFNGR2 | IFNG | 25361965 | interaction type | N/A | PTMCode2 |
| IFNG | IFNGR1 | 25361965 | interaction type | N/A | PTMCode2 |
| IFNGR1 | IFNG | 25361965 | interaction type | N/A | PTMCode2 |
| IFNG | TNF | 25361965 | interaction type | N/A | PTMCode2 |
| TNF | IFNG | 25361965 | interaction type | N/A | PTMCode2 |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| PDIA3 | IFNG | 14525934 25348397 27898060 8974399 | N/A | experimental interaction detection,in vivo | ComPPI,HPRD,OmniPath |
| IFNGR1 | IFNG | 10986460 11250200 12165521 14525934 24234451 25348397 7617032 | N/A | experimental interaction detection,x-ray crystallography,physical interaction,in vitro,in vivo | ComPPI,HPRD,IntAct |
| IFNGR2 | IFNG | 14525934 25348397 7673114 | N/A | experimental interaction detection,physical interaction,in vivo | ComPPI,HPRD |
| IFNG | TNF | 14525934 25348397 3139842 | N/A | experimental interaction detection,in vitro,in vivo | ComPPI,HPRD |
| IFNG | STAT6 | 25348397 | N/A | physical interaction | ComPPI |
| IFNG | GOPC | 25348397 | N/A | physical interaction | ComPPI |
| IFNG | IFNG | 10860730 14525934 | N/A | experimental interaction detection | HPRD |
| RUNX1 | IFNG | 17377532 24234451 | association | chromatin immunoprecipitation assay | IntAct |
| FOXP3 | IFNG | 23543754 24234451 | association | chromatin immunoprecipitation assay | IntAct |
| TRIM28 | IFNG | 23543754 24234451 | association | chromatin immunoprecipitation assay | IntAct |
| IFNG | IFNGR1 | 10811850 10860730 10986460 11250200 12165521 12438563 16110316 23898330 27898060 7617032 7673114 | stimulant | N/A | OmniPath |
| IFNGR1 | IFNG | 10860730 10986460 11250200 12165521 27898060 7617032 7673114 | N/A | N/A | OmniPath |
| IFNG | PSME1 | 27898060 8051173 | N/A | N/A | OmniPath |
| IFNG | IFNGR2 | 10811850 12438563 27898060 7673114 | stimulant | N/A | OmniPath |
| IFNGR2 | IFNG | 27898060 7673114 | N/A | N/A | OmniPath |
| IFNG | PSME2 | 27898060 8051173 | N/A | N/A | OmniPath |
| IFNG | PSMB8 | 27898060 8811196 | N/A | N/A | OmniPath |
| IFNG | PSMB9 | 27898060 8811196 | N/A | N/A | OmniPath |
| IFNG | PSMB10 | 27898060 8811196 | stimulant | N/A | OmniPath |
