Gene Information gene info

GENE:SFXN5

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SFXN5
FullNmae sideroflexin 5
LocusType gene with protein product
Status Approved
HGNC_id HGNC:16073
EnsembleID ENSG00000144040
Uniprot Q8TD22

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SFXN5 mpt 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SFXN5 GO:0005515,GO:0005739,GO:0005743,GO:0006865,GO:0015075,GO:0015137,GO:0015746,GO:0034220,GO:0120162,GO:1990542

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
E2F4 SFXN5 17531812 18971253 trascriptional regulation,stimulation chromatin immunoprecipitation array,inferred by curator TFlink
ETS1 SFXN5 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA1 SFXN5 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 SFXN5 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
YBX1 SFXN5 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
PRDM14 SFXN5 18971253 20953172 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 SFXN5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA SFXN5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SFXN5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 SFXN5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 SFXN5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 SFXN5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS SFXN5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A SFXN5 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00002C0FCB SFXN5 20371350 25416803 mrna cleavage,inhibition nucleotide sequence identification TarBase
URS00000DDD35 SFXN5 20371350 25416803 mrna cleavage,inhibition nucleotide sequence identification TarBase
URS00002F5FEE SFXN5 20371350 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000021D7C8 SFXN5 20371350 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000075ABF4 SFXN5 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00001E3523 SFXN5 20371350 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000003BF62 SFXN5 20371350 21572407 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
ACTB SFXN5 25348397 N/A physical interaction ComPPI
PON1 SFXN5 25348397 N/A physical interaction ComPPI
TNF SFXN5 25348397 N/A physical interaction ComPPI
CTSA SFXN5 25348397 N/A physical interaction ComPPI
EBP SFXN5 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
HTR2C SFXN5 25348397 N/A physical interaction ComPPI
TRIM25 SFXN5 25348397 N/A physical interaction ComPPI
FAS SFXN5 25348397 N/A physical interaction ComPPI
APOL2 SFXN5 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
MAS1 SFXN5 25348397 N/A physical interaction ComPPI
SLC5A5 SFXN5 25348397 N/A physical interaction ComPPI
SFXN5 SLC18A1 25348397 N/A physical interaction ComPPI
SFXN5 SLC15A1 25348397 N/A physical interaction ComPPI

Visualization