Gene Information gene info

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GENE：SMDT1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SMDT1
FullNmae single-pass membrane protein with aspartate rich tail 1
LocusType gene with protein product
Status Approved
HGNC_id HGNC:25055
EnsembleID ENSG00000183172
Uniprot Q9H4I9

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SMDT1 mpt 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SMDT1 GO:0005515,GO:0005654,GO:0005739,GO:0005743,GO:0005743,GO:0005743,GO:0005759,GO:0006851,GO:0036444,GO:0036444,GO:0036444,GO:0036444,GO:0051560,GO:0051560,GO:0051560,GO:0051560,GO:1990246,GO:1990246,GO:1990246,GO:1990246,GO:1990246

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
YBX1 SMDT1 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
CTCF SMDT1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS SMDT1 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00003D5391 SMDT1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00001BCAC5 SMDT1 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00001F0C23 SMDT1 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS0000160683 SMDT1 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000007D64A SMDT1 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00000F0F49 SMDT1 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000040EE1D SMDT1 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000041CB9C SMDT1 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS0000171CD1 SMDT1 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000017CCCB SMDT1 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00000D2680 SMDT1 20371350 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
EIF2B2 SMDT1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
PDCD1 SMDT1 25348397 N/A physical interaction ComPPI
EIF2B1 SMDT1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
EIF2B5 SMDT1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
MTOR SMDT1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
ASPH SMDT1 25348397 N/A physical interaction ComPPI
EIF2B4 SMDT1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
EIF2B3 SMDT1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
MOV10 SMDT1 25348397 N/A physical interaction ComPPI
MYLK2 SMDT1 25348397 N/A physical interaction ComPPI

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