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GENE：TNFSF13B

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol TNFSF13B
FullNmae TNF superfamily member 13b
LocusType gene with protein product
Status Approved
HGNC_id HGNC:11929
EnsembleID ENSG00000102524
Uniprot Q9Y275

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
TNFSF13B immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
TNFSF13B GO:0001782,GO:0002467,GO:0002636,GO:0005102,GO:0005125,GO:0005164,GO:0005515,GO:0005576,GO:0005615,GO:0005737,GO:0005886,GO:0005925,GO:0007165,GO:0016020,GO:0030183,GO:0030890,GO:0030890,GO:0030890,GO:0031295,GO:0031296,GO:0033209,GO:0042098,GO:0042100,GO:0042102,GO:0043231,GO:0048018,GO:0048471

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
TNFSF13B hsa:10673 path:hsa04060 Cytokine-cytokine receptor interaction - Homo sapiens (human)
TNFSF13B hsa:10673 path:hsa04064 NF-kappa B signaling pathway - Homo sapiens (human)
TNFSF13B hsa:10673 path:hsa04672 Intestinal immune network for IgA production - Homo sapiens (human)
TNFSF13B hsa:10673 path:hsa05323 Rheumatoid arthritis - Homo sapiens (human)

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AHR TNFSF13B 17823304 17900530 23180781 physical association electrophoretic mobility supershift assay InnateDB
TNFSF13B REL 17567982 23180781 physical association anti tag coimmunoprecipitation InnateDB
TNFSF13B CD40 16644731 17567982 23180781 physical association anti tag coimmunoprecipitation,electrophoretic mobility supershift assay InnateDB
TNFSF13 TNFSF13B 12370363 23180781 physical association anti tag coimmunoprecipitation InnateDB
TNFRSF17 TNFSF13B 12571250 23180781 physical association surface plasmon resonance InnateDB
TNFRSF13C TNFSF13B 12571250 23180781 physical association surface plasmon resonance InnateDB
TNFSF13B TNFSF13B 15644327 15851487 26467481 bind,up-regulates activity N/A Signor

Source Target Pmid Interactiontype Methods Database
TP53 TNFSF13B 18922183 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 TNFSF13B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA TNFSF13B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF TNFSF13B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 TNFSF13B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TAL1 TNFSF13B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ZNF263 TNFSF13B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
NFKB1 TNFSF13B 16497967 trascriptional regulation,stimulation inferred by curator TFlink
STAT1 TNFSF13B 23271704 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00000F31F4 TNFSF13B 19074876 25416803 mrna cleavage,inhibition array technology TarBase
URS00000B59A2 TNFSF13B 19074876 25416803 mrna cleavage,inhibition array technology TarBase
URS00003D8730 TNFSF13B 25416803 25971527 26689580 mrna cleavage,inhibition experimental interaction detection,western blot,quantitative reverse transcription pcr,miRNA interference luciferase reporter assay TarBase
URS0000065D58 TNFSF13B 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS000005CF5F TNFSF13B 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS00001DE669 TNFSF13B 25416803 27418678 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
HLA-DPB1 TNFSF13B 25348397 N/A physical interaction ComPPI
ITGA7 TNFSF13B 25348397 N/A physical interaction ComPPI
ITGB1 TNFSF13B 25348397 N/A physical interaction ComPPI
ITGAV TNFSF13B 25348397 N/A physical interaction ComPPI
NUP85 TNFSF13B 25348397 N/A physical interaction ComPPI
MAP3K5 TNFSF13B 25348397 N/A physical interaction ComPPI
PIGQ TNFSF13B 25348397 N/A physical interaction ComPPI
FANCD2 TNFSF13B 25348397 N/A physical interaction ComPPI
TNFRSF17 TNFSF13B 10801128 10908663 10973284 14525934 24234451 25348397 physical association experimental interaction detection,physical interaction,saturation binding,in vitro,in vivo ComPPI,HPRD,IntAct
TNFSF13B TNFRSF13B 10801128 10880535 10956646 14525934 24234451 25348397 physical association anti tag coimmunoprecipitation,experimental interaction detection,fluorescence-activated cell sorting,surface plasmon resonance,physical interaction,biochemical,saturation binding,in vitro,in vivo ComPPI,HPRD,IntAct
TNFSF13B TNFRSF13C 11509692 12721620 14525934 25348397 N/A experimental interaction detection,physical interaction,in vitro,in vivo ComPPI,HPRD
TNFSF13B TNFSF13 12370363 14525934 25348397 27898060 N/A experimental interaction detection,physical interaction ComPPI,HPRD,OmniPath
TNFSF13B APP 25348397 N/A physical interaction ComPPI
TNFSF13B TNFSF12 25348397 N/A physical interaction ComPPI
TNFSF13B CAND2 25348397 N/A physical interaction ComPPI
TNFSF13B IPO7 25348397 N/A physical interaction ComPPI
TNFSF13B PDSS1 25348397 N/A physical interaction ComPPI
TNFSF13B MON2 25348397 N/A physical interaction ComPPI
TNFSF13B RANBP6 25348397 N/A physical interaction ComPPI
TNFSF13B MFAP3 25348397 N/A physical interaction ComPPI
TNFSF13B FHIP2A 25348397 N/A physical interaction ComPPI
TNFSF13B BPNT2 25348397 N/A physical interaction ComPPI
TNFSF13B HOOK2 25348397 N/A physical interaction ComPPI
TNFSF13B TTC17 25348397 N/A physical interaction ComPPI
TNFSF13B HOOK1 25348397 N/A physical interaction ComPPI
TNFSF13B BRAT1 25348397 N/A physical interaction ComPPI
TNFSF13B LRIG3 25348397 N/A physical interaction ComPPI
TNFSF13B IPO8 25348397 N/A physical interaction ComPPI
TNFSF13B MAP3K6 25348397 N/A physical interaction ComPPI
TNFSF13B MAP3K15 25348397 N/A physical interaction ComPPI
TNFSF13B IPO11 25348397 N/A physical interaction ComPPI
TNFSF13B TMEM131 25348397 N/A physical interaction ComPPI
TNFSF13B HEATR1 25348397 N/A physical interaction ComPPI
TNFSF13B TNPO2 25348397 N/A physical interaction ComPPI
TNFSF13B NF1 25348397 N/A physical interaction ComPPI
TNFSF13B IPO9 25348397 N/A physical interaction ComPPI
TNFSF13B NCAPG 25348397 N/A physical interaction ComPPI
TNFSF13B FAM118A 25348397 N/A physical interaction ComPPI
TNFSF13B SAAL1 25348397 N/A physical interaction ComPPI
TNFSF13B BTAF1 25348397 N/A physical interaction ComPPI
TNFSF13B HOOK3 25348397 N/A physical interaction ComPPI
TNFSF13B AKTIP 25348397 N/A physical interaction ComPPI
TNFSF13B FHIP1B 25348397 N/A physical interaction ComPPI
TNFSF13B PRR35 25348397 N/A physical interaction ComPPI
TNFSF13B TMEM39A 25348397 N/A physical interaction ComPPI
TNFSF13B ARSK 25348397 N/A physical interaction ComPPI
TNFSF13B CHST12 25348397 N/A physical interaction ComPPI
TNFSF13B VTI1B 25348397 N/A physical interaction ComPPI
TNFSF13B PXYLP1 25348397 N/A physical interaction ComPPI
TNFSF13B DYM 25348397 N/A physical interaction ComPPI
XPO4 TNFSF13B 25348397 N/A physical interaction ComPPI
TNFSF13B TNFSF13B 11853672 11862220 12721620 14525934 N/A experimental interaction detection HPRD
TNFSF13B STAT1 23271704 24234451 association chromatin immunoprecipitation assay IntAct
TNFSF13B MAP3K14 17183360 27898060 stimulant N/A OmniPath
TNFSF13B TNFRSF13B 10801128 10880535 10956646 23493554 27898060 stimulant N/A OmniPath
TNFSF13B TNFRSF13C 11509692 12571250 12721620 15644327 15851487 23493554 27898060 stimulant N/A OmniPath

Visualization










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