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GENE：VPS51

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol VPS51
FullNmae VPS51 subunit of GARP complex
LocusType gene with protein product
Status Approved
HGNC_id HGNC:1172
EnsembleID ENSG00000149823
Uniprot Q9UID3

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
VPS51 lysosomal_cd 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
VPS51 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
VPS51 GO:0000938,GO:0000938,GO:0000938,GO:0003674,GO:0005515,GO:0005730,GO:0005794,GO:0005829,GO:0006605,GO:0006914,GO:0007030,GO:0007041,GO:0007041,GO:0016020,GO:0016020,GO:0016020,GO:0032456,GO:0032456,GO:0032456,GO:0032588,GO:0042147,GO:0042147,GO:0042147,GO:0042147,GO:0043231,GO:0048193,GO:0048854,GO:0055037,GO:0055037,GO:0090119,GO:1990745,GO:1990745,GO:1990745

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
E2F4 VPS51 17531812 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 VPS51 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
YBX1 VPS51 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 VPS51 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA VPS51 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF VPS51 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 VPS51 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 VPS51 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 VPS51 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXP1 VPS51 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS VPS51 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A VPS51 18971253 trascriptional regulation,stimulation inferred by curator TFlink
VDR VPS51 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000324096 VPS51 18668040 25416803 mrna cleavage,inhibition experimental interaction detection TarBase
URS000005481D VPS51 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00001CC379 VPS51 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00001F0C23 VPS51 25172656 25416803 mrna cleavage,inhibition miRNA interference luciferase reporter assay TarBase
URS0000419B5A VPS51 20371350 23592263 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000033B548 VPS51 20371350 23592263 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000035D2F9 VPS51 20371350 23592263 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000075C4B1 VPS51 20371350 23592263 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002CBC6D VPS51 20371350 23592263 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002971AB VPS51 23708386 25416803 mrna cleavage,inhibition clip TarBase
URS00001C3AC1 VPS51 23708386 25416803 mrna cleavage,inhibition clip TarBase
URS00004F4657 VPS51 25416803 27570490 mrna cleavage,inhibition experimental interaction detection,western blot,quantitative reverse transcription pcr,immunohistochemistry,miRNA interference luciferase reporter assay TarBase

Source Target Pmid Interactiontype Methods Database
CDC5L VPS51 20467437 24234451 25348397 association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
OIP5 VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
TFPT VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
TFRC VPS51 25348397 N/A physical interaction,tandem affinity purification ComPPI
SNAP29 VPS51 25348397 N/A physical interaction,physical interaction,tandem affinity purification ComPPI
CDKN1A VPS51 21988832 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
ETS2 VPS51 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
GSK3B VPS51 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
NTRK1 VPS51 25348397 N/A physical interaction ComPPI
HMG20A VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
EXOC4 VPS51 24234451 25348397 27173435 association,physical association physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
LMNB1 VPS51 25348397 N/A physical interaction,tandem affinity purification ComPPI
YTHDC1 VPS51 21988832 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
GIT2 VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
GRIPAP1 VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
TUFT1 VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
ARNTL VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
CD79B VPS51 25348397 N/A physical interaction ComPPI
CAVIN1 VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
CDK12 VPS51 25348397 N/A physical interaction ComPPI
DTNBP1 VPS51 25348397 N/A physical interaction ComPPI
PHF21A VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
MLH1 VPS51 20706999 24234451 25348397 physical association two hybrid ComPPI,IntAct
YEATS4 VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
CLOCK VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
TGOLN2 VPS51 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
PKN3 VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
STX6 VPS51 25348397 N/A two hybrid,isothermal titration calorimetry,pull down,x-ray crystallography,physical interaction,physical interaction ComPPI
BET1 VPS51 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
VAMP4 VPS51 25348397 N/A two hybrid,physical interaction ComPPI
KIFC3 VPS51 25348397 N/A physical interaction,tandem affinity purification ComPPI
DZIP3 VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
AIFM1 VPS51 25348397 N/A physical interaction,tandem affinity purification ComPPI
SCLT1 VPS51 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
VPS52 VPS51 25348397 N/A pull down,physical interaction,physical interaction,tandem affinity purification ComPPI
BSG VPS51 25348397 N/A physical interaction ComPPI
CCHCR1 VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
NCKAP5L VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
HAUS6 VPS51 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
VPS35 VPS51 11598206 15263065 17696874 17892535 27898060 9700157 N/A N/A OmniPath

Visualization










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