Gene Information gene info

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GENE：GDE1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol GDE1
FullNmae glycerophosphodiester phosphodiesterase 1
LocusType gene with protein product
Status Approved
HGNC_id HGNC:29644
EnsembleID ENSG00000006007
Uniprot Q9NZC3

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
GDE1 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
GDE1 GO:0004622,GO:0005515,GO:0005886,GO:0005886,GO:0005886,GO:0006580,GO:0006580,GO:0006629,GO:0006644,GO:0006644,GO:0008889,GO:0008889,GO:0008889,GO:0016020,GO:0030659,GO:0046475,GO:0046872,GO:0047395,GO:0047395,GO:0070291,GO:0070291

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
GATA2 GDE1 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
FOXP3 GDE1 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 GDE1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA GDE1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF GDE1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 GDE1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ETS1 GDE1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 GDE1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXP1 GDE1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS GDE1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A GDE1 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000324096 GDE1 18668040 25416803 mrna cleavage,inhibition experimental interaction detection,experimental interaction detection,experimental interaction detection TarBase
URS00000EED18 GDE1 20371350 25416803 mrna cleavage,inhibition nucleotide sequence identification TarBase
URS000003ABC4 GDE1 19088304 23622248 25416803 mrna cleavage,inhibition array technology,clash TarBase
URS00003D5391 GDE1 19536157 23622248 25416803 mrna cleavage,inhibition clip,clash TarBase
URS00000451A1 GDE1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00001A405B GDE1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS0000157026 GDE1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00000AD002 GDE1 20371350 21572407 23446348 23592263 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS000075C4B1 GDE1 20371350 21572407 23446348 23592263 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS00000C4DB5 GDE1 20371350 21572407 23446348 23592263 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS000007F792 GDE1 20371350 21572407 23446348 23592263 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS000075AB0E GDE1 23592263 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS0000527B00 GDE1 20371350 21572407 23446348 23592263 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS00001C0099 GDE1 20371350 21572407 23446348 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS0000355E82 GDE1 20371350 21572407 23446348 23592263 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS000041FA2C GDE1 20371350 21572407 23446348 23592263 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00004F2EB0 GDE1 20371350 21572407 23446348 23592263 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS00005D986D GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS0000508C13 GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS0000045DBD GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS00001E0AEA GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS0000260A3A GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS000038718E GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS00003A8BB2 GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS0000080D0A GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS000008AA34 GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS00002C02E4 GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS000039A25B GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS000075B13F GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS000075AEA5 GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS00004283FE GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS0000118224 GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS000037B2E0 GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS00000319E1 GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS0000496C56 GDE1 21572407 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS000061E50F GDE1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00001F14FE GDE1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00001D4A78 GDE1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00002CEB74 GDE1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00000753AD GDE1 21572407 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000003FD55 GDE1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000367985 GDE1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00005C1F22 GDE1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000027464B GDE1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00000C7662 GDE1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000028C188 GDE1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000215483 GDE1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000006372A GDE1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00003FBC84 GDE1 21572407 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000032FC1A GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00004818BD GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000F4AC3 GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000AA464 GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000547F6A GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001F373E GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000027F5F3 GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000045ED38 GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000759B6A GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000221168 GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000018E6CD GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000020579D GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000913AC GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00004CCA62 GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000544FF1 GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000D5FFC GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000183BED GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001CC864 GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000411752 GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00003AD2AA GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001CE046 GDE1 23824327 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS000013ABA3 GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000086A4D GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00003380CC GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00005CC20C GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000411672 GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00004AAAFF GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00005ACA7C GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000007A060 GDE1 23824327 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS00000A939F GDE1 23824327 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS00000C5BAA GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000003575B GDE1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00003E5ECC GDE1 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS000042935A GDE1 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS000075BC91 GDE1 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS000029D793 GDE1 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00000254A6 GDE1 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00004AC389 GDE1 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000171020 GDE1 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS00000BE495 GDE1 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000419B5A GDE1 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000334286 GDE1 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000585553 GDE1 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000512C88 GDE1 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS000072B4C8 GDE1 25416803 27418678 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
RGS16 GDE1 10760272 14525934 25348397 N/A two hybrid,experimental interaction detection,physical interaction,in vitro,two hybrid ComPPI,HPRD
PLSCR1 GDE1 25348397 N/A physical interaction ComPPI
PROCR GDE1 25348397 N/A physical interaction ComPPI
HNRNPL GDE1 25348397 N/A physical interaction ComPPI
RGS19 GDE1 10760272 14525934 25348397 N/A two hybrid,two hybrid ComPPI,HPRD
RGS2 GDE1 10760272 14525934 25348397 N/A two hybrid,experimental interaction detection,physical interaction,in vitro,two hybrid ComPPI,HPRD
GDE1 RGS1 10760272 14525934 25348397 N/A two hybrid,two hybrid ComPPI,HPRD
GDE1 CLGN 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
GDE1 SLC4A7 25348397 N/A physical interaction ComPPI
GDE1 GAPDHS 25348397 N/A physical interaction ComPPI
GDE1 ATL3 25348397 N/A physical interaction ComPPI
GDE1 HNRNPA1 25348397 N/A physical interaction ComPPI
GDE1 CDK14 25348397 N/A physical interaction ComPPI
GDE1 GAP43 25348397 N/A physical interaction ComPPI
ADRA1A GDE1 24234451 28298427 physical association ubiquitin reconstruction IntAct

Visualization










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