Gene Information gene info

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GENE：SYP

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SYP
FullNmae synaptophysin
LocusType gene with protein product
Status Approved
HGNC_id HGNC:11506
EnsembleID ENSG00000102003
Uniprot P08247

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SYP immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
SYP autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SYP GO:0005515,GO:0006897,GO:0008021,GO:0015485,GO:0016188,GO:0030672,GO:0030672,GO:0031594,GO:0042169,GO:0042734,GO:0042802,GO:0043005,GO:0043005,GO:0043195,GO:0048168,GO:0048169,GO:0048172,GO:0048471,GO:0048488,GO:0048499,GO:0048786,GO:0060076,GO:0071310,GO:0098685,GO:2000300,GO:2000474

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 SYP 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
NR1I2 SYP 19129222 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 SYP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SYP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS SYP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
PKNOX1 SYP 20864515 trascriptional regulation,stimulation inferred by curator TFlink
SP1 SYP 12492469 trascriptional regulation,stimulation inferred by curator TFlink
DAND5 SYP 12492469 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000237AF9 SYP 18185580 25416803 mrna cleavage,inhibition array technology TarBase
URS00004719AB SYP 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00002D2333 SYP 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00002E1509 SYP 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00002A71AD SYP 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000136174 SYP 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000427B68 SYP 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00002233F4 SYP 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00001EFEC1 SYP 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000285DCB SYP 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
EPOR SYP 25361965 interaction type N/A PTMCode2
SYP EPOR 25361965 interaction type N/A PTMCode2
SYP SIAH2 25361965 interaction type N/A PTMCode2
SIAH2 SYP 25361965 interaction type N/A PTMCode2
SYP GRB2 25361965 interaction type N/A PTMCode2
GRB2 SYP 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
FARS2 SYP 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SH3GLB1 SYP 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SORBS3 SYP 25348397 N/A physical interaction ComPPI
VAMP2 SYP 12181340 12485399 14525934 18706977 20114047 21645620 25348397 27898060 N/A experimental interaction detection,in vitro,in vivo ComPPI,HPRD,OmniPath
PTS SYP 25348397 N/A physical interaction ComPPI
PTPN9 SYP 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SIAH2 SYP 11786535 14525934 25348397 N/A experimental interaction detection,in vitro,in vivo ComPPI,HPRD
GRB2 SYP 14525934 25348397 8547634 N/A experimental interaction detection,in vitro ComPPI,HPRD
PNKP SYP 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SIAH1 SYP 11786535 14525934 25348397 N/A two hybrid,experimental interaction detection,physical interaction,in vitro,in vivo,two hybrid ComPPI,HPRD
GAB1 SYP 25348397 N/A physical interaction ComPPI
SNX1 SYP 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
HAX1 SYP 25348397 N/A physical interaction ComPPI
APBB1 SYP 25348397 N/A physical interaction ComPPI
RNASEL SYP 25348397 N/A physical interaction ComPPI
STX1A SYP 25348397 N/A physical interaction ComPPI
AP1G1 SYP 12498786 14525934 25348397 N/A two hybrid,physical interaction,two hybrid ComPPI,HPRD
SYP SRCIN1 25348397 N/A physical interaction ComPPI
SYP NUFIP1 25348397 N/A physical interaction ComPPI
SYP CDCA8 25348397 N/A physical interaction ComPPI
SYP DGUOK 25348397 N/A physical interaction ComPPI
SYP DNAAF2 25348397 N/A physical interaction ComPPI
SYP TMEM183A 25348397 N/A physical interaction ComPPI
SYP SLC25A23 25348397 N/A physical interaction ComPPI
SYP MRS2 25348397 N/A physical interaction ComPPI
SYP SLC35B2 25348397 N/A physical interaction ComPPI
SYP SFXN3 25348397 N/A physical interaction ComPPI
SYP SLC20A2 25348397 N/A physical interaction ComPPI
SYP SLC25A16 25348397 N/A physical interaction ComPPI
SYP TMTC4 25348397 N/A physical interaction ComPPI
SYP SGPP1 25348397 N/A physical interaction ComPPI
SYP ATP9A 25348397 N/A physical interaction ComPPI
SYP TMEM87A 25348397 N/A physical interaction ComPPI
SYP EXT1 25348397 N/A physical interaction ComPPI
SYP TMEM186 25348397 N/A physical interaction ComPPI
SYP KDELR3 25348397 N/A physical interaction ComPPI
SYP SPAG9 25348397 N/A physical interaction ComPPI
SYP TMEM164 25348397 N/A physical interaction ComPPI
SYP SLC38A10 25348397 N/A physical interaction ComPPI
SYP MBOAT7 25348397 N/A physical interaction ComPPI
SYP ARV1 25348397 N/A physical interaction ComPPI
SYP ARL5B 25348397 N/A physical interaction ComPPI
SYP GK 25348397 N/A physical interaction ComPPI
SYP HTT 17500595 24234451 25348397 association pull down ComPPI,IntAct
SYP PPIF 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP MRRF 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP ARFIP2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP SPG21 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP PLIN3 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP STARD4 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP CAND2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP HSFX1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP JOSD2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP PTCD1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP MRM1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP THAP4 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP RBFA 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP WDFY2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP MTERF3 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP MIEF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
CD160 SYP 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
MYG1 SYP 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SYP DNAJC5 24234451 29997244 physical association bioluminescence resonance energy transfer IntAct

Source Target Pmid Interactiontype Methods Database
URS00008BB3EE SYP 27087310 direct interaction,inhibition N/A NPInter

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