Gene Information gene info

GENE:COL1A1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol COL1A1
FullNmae collagen type I alpha 1 chain
LocusType gene with protein product
Status Approved
HGNC_id HGNC:2197
EnsembleID ENSG00000108821
Uniprot P02452

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
COL1A1 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
COL1A1 GO:0001501,GO:0001501,GO:0001503,GO:0001568,GO:0001568,GO:0001649,GO:0001957,GO:0001958,GO:0002020,GO:0005515,GO:0005576,GO:0005576,GO:0005584,GO:0005584,GO:0005584,GO:0005584,GO:0005615,GO:0005615,GO:0005615,GO:0005737,GO:0005788,GO:0007601,GO:0007605,GO:0009410,GO:0009612,GO:0010718,GO:0010812,GO:0015031,GO:0030020,GO:0030020,GO:0030020,GO:0030020,GO:0030141,GO:0030198,GO:0030199,GO:0030199,GO:0030335,GO:0032355,GO:0032868,GO:0032964,GO:0034504,GO:0034505,GO:0038063,GO:0042542,GO:0042802,GO:0043588,GO:0043589,GO:0044344,GO:0045893,GO:0046872,GO:0048407,GO:0048545,GO:0048706,GO:0051591,GO:0055093,GO:0060325,GO:0060346,GO:0060351,GO:0062023,GO:0062023,GO:0062023,GO:0071230,GO:0071260,GO:0071300,GO:0071306,GO:0071356,GO:0071364,GO:0071560,GO:0090263,GO:1902618

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
COL1A1 hsa:1277 path:hsa04151 PI3K-Akt signaling pathway - Homo sapiens (human)
COL1A1 hsa:1277 path:hsa04510 Focal adhesion - Homo sapiens (human)
COL1A1 hsa:1277 path:hsa04512 ECM-receptor interaction - Homo sapiens (human)
COL1A1 hsa:1277 path:hsa04611 Platelet activation - Homo sapiens (human)
COL1A1 hsa:1277 path:hsa04926 Relaxin signaling pathway - Homo sapiens (human)
COL1A1 hsa:1277 path:hsa04933 AGE-RAGE signaling pathway in diabetic complications - Homo sapiens (human)
COL1A1 hsa:1277 path:hsa04974 Protein digestion and absorption - Homo sapiens (human)
COL1A1 hsa:1277 path:hsa05146 Amoebiasis - Homo sapiens (human)
COL1A1 hsa:1277 path:hsa05165 Human papillomavirus infection - Homo sapiens (human)
COL1A1 hsa:1277 path:hsa05205 Proteoglycans in cancer - Homo sapiens (human)
COL1A1 hsa:1277 path:hsa05415 Diabetic cardiomyopathy - Homo sapiens (human)

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
COL1A1 ZBTB7B 19558215 23180781 physical association electrophoretic mobility supershift assay,nucleic acid uv cross-linking assay InnateDB
SP1 COL1A1 19558215 23180781 physical association anti tag coimmunoprecipitation,electrophoretic mobility supershift assay,nucleic acid uv cross-linking assay InnateDB
SMAD4 COL1A1 19558215 23180781 physical association anti tag coimmunoprecipitation,electrophoretic mobility supershift assay,nucleic acid uv cross-linking assay InnateDB
SMAD3 COL1A1 19558215 23180781 physical association nucleic acid uv cross-linking assay InnateDB
SMAD2 COL1A1 19558215 23180781 physical association nucleic acid uv cross-linking assay InnateDB
DDR1 COL1A1 21815193 23180781 physical association solid phase assay InnateDB
COL1A1 ELAVL1 19322201 23180781 physical association anti tag coimmunoprecipitation InnateDB

Source Target Pmid Interactiontype Methods Database
ETS1 COL1A1 16564026 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA1 COL1A1 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 COL1A1 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SP1 COL1A1 10082137 10091149 10775443 12138160 16564026 17698844 7504695 7590335 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SP3 COL1A1 10082137 17698844 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
ZBTB7B COL1A1 17698844 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SP7 COL1A1 19429913 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
ZNF384 COL1A1 19429913 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 COL1A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF COL1A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 COL1A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXP1 COL1A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS COL1A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A COL1A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TP53 COL1A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CIITA COL1A1 16439692 trascriptional regulation,stimulation inferred by curator TFlink
MRTFA COL1A1 22049076 trascriptional regulation,stimulation inferred by curator TFlink
MYB COL1A1 9989795 trascriptional regulation,stimulation inferred by curator TFlink
MYBL2 COL1A1 14613485 trascriptional regulation,stimulation inferred by curator TFlink
NFIC COL1A1 10082137 7504695 trascriptional regulation,stimulation inferred by curator TFlink
NFKB1 COL1A1 11277268 trascriptional regulation,stimulation inferred by curator TFlink
RELA COL1A1 11277268 trascriptional regulation,stimulation inferred by curator TFlink
DAND5 COL1A1 10082137 10091149 10775443 12138160 16564026 7504695 7590335 trascriptional regulation,stimulation inferred by curator TFlink
STAT6 COL1A1 14603527 trascriptional regulation,stimulation inferred by curator TFlink
TFAP2A COL1A1 10775443 trascriptional regulation,stimulation inferred by curator TFlink
FLI1 COL1A1 N/A trascriptional regulation,stimulation inferred by curator TFlink
JUN COL1A1 N/A trascriptional regulation,stimulation inferred by curator TFlink
SMAD1 COL1A1 N/A trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000008A99 COL1A1 19913496 rna interference,inhibition experimental interaction detection,quantitative reverse transcription pcr,miRNA interference luciferase reporter assay miRSponge
URS0000272A3D COL1A1 N/A 18390668 \N rna interference,inhibition experimental interaction detection,miRNA interference luciferase reporter assay miRSponge
URS0000272A3D COL1A1 18390668 18927107 21125666 25416803 mrna cleavage,inhibition experimental interaction detection,quantitative reverse transcription pcr,immunohistochemistry,miRNA interference luciferase reporter assay miR2Disease,TarBase
URS0000008A99 COL1A1 19913496 22942087 25416803 mrna cleavage,inhibition array technology,experimental interaction detection,quantitative reverse transcription pcr,miRNA interference luciferase reporter assay TarBase
URS0000321A1A COL1A1 24374217 25416803 mrna cleavage,inhibition clip TarBase
URS0000149319 COL1A1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001123BD COL1A1 25416803 25827718 mrna cleavage,inhibition quantitative reverse transcription pcr,miRNA interference luciferase reporter assay TarBase
URS00002367FA COL1A1 25416803 26701625 28259900 mrna cleavage,inhibition clip,miRNA interference luciferase reporter assay TarBase
URS000060AABB COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000FC8EB COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000059EB31 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000C4DB5 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000032AE90 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000383DF4 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000A9FB9 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000006F90B COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00004818BD COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000B989F COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00001B968D COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00006097A6 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000030F801 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000045ED38 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000027F5F3 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00003E5ECC COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000475586 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000547F6A COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000047A8F COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000078918 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00001F373E COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000F6E49 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00001D99D1 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000214763 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000331800 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000075C1E1 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000075BDA4 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000235862 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00001012BC COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000036AFF1 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002A8BC6 COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000041FA2C COL1A1 25416803 26701625 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
DCN COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 DCN 25361965 interaction type N/A PTMCode2
MMP2 COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 MMP2 25361965 interaction type N/A PTMCode2
COL1A1 SPARC 25361965 interaction type N/A PTMCode2
SPARC COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 VWF 25361965 interaction type N/A PTMCode2
VWF COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 NID1 25361965 interaction type N/A PTMCode2
NID1 COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 CD44 25361965 interaction type N/A PTMCode2
CD44 COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 ITGA5 25361965 interaction type N/A PTMCode2
ITGA5 COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 ITGA2 25361965 interaction type N/A PTMCode2
ITGA2 COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 COL1A2 25361965 interaction type N/A PTMCode2
COL1A2 COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 BMP1 25361965 interaction type N/A PTMCode2
BMP1 COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 CD36 25361965 interaction type N/A PTMCode2
CD36 COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 BGN 25361965 interaction type N/A PTMCode2
BGN COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 P4HB 25361965 interaction type N/A PTMCode2
P4HB COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 COL7A1 25361965 interaction type N/A PTMCode2
COL7A1 COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 MMP9 25361965 interaction type N/A PTMCode2
MMP9 COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 TXN 25361965 interaction type N/A PTMCode2
TXN COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 ITGB1 25361965 interaction type N/A PTMCode2
ITGB1 COL1A1 25361965 interaction type N/A PTMCode2
COL1A1 COL1A1 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
COL1A2 COL1A1 25348397 N/A physical interaction ComPPI
ANXA1 COL1A1 23754495 24234451 25348397 association anti bait coimmunoprecipitation ComPPI,IntAct
KEAP1 COL1A1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
GIPC2 COL1A1 25348397 N/A physical interaction ComPPI
CD44 COL1A1 14525934 1730778 25348397 N/A experimental interaction detection,in vitro ComPPI,HPRD
PAK1 COL1A1 25348397 N/A in vitro ComPPI
TLE3 COL1A1 25348397 N/A physical interaction ComPPI
CD36 COL1A1 14525934 2468670 25348397 27898060 N/A experimental interaction detection,in vitro ComPPI,HPRD,OmniPath
UBXN11 COL1A1 25348397 N/A physical interaction ComPPI
ITGB1 COL1A1 25348397 N/A physical interaction ComPPI
UBC COL1A1 25348397 N/A physical interaction ComPPI
BGN COL1A1 14525934 25348397 7852349 N/A experimental interaction detection,in vitro ComPPI,HPRD
DDR1 COL1A1 25348397 N/A enzyme linked immunosorbent assay ComPPI
RNH1 COL1A1 25348397 N/A physical interaction ComPPI
PKD1 COL1A1 25348397 N/A physical interaction ComPPI
SPARC COL1A1 14525934 25348397 7034958 N/A experimental interaction detection,physical interaction,in vitro ComPPI,HPRD
THBS1 COL1A1 14525934 25348397 3571333 N/A experimental interaction detection,physical interaction,in vitro ComPPI,HPRD
PDGFB COL1A1 10446987 14525934 25348397 27898060 8900172 N/A experimental interaction detection,physical interaction,in vitro ComPPI,HPRD,OmniPath
PDGFA COL1A1 25348397 N/A physical interaction ComPPI
P4HB COL1A1 1339453 14525934 25348397 27898060 N/A experimental interaction detection,in vitro ComPPI,HPRD,OmniPath
TXN COL1A1 12099690 14525934 25348397 27898060 N/A two hybrid,experimental interaction detection,physical interaction,in vitro,two hybrid ComPPI,HPRD,OmniPath
LIN9 COL1A1 25348397 N/A physical interaction ComPPI
EGFR COL1A1 25348397 N/A physical interaction ComPPI
DDR2 COL1A1 14525934 25348397 9659899 N/A experimental interaction detection,in vitro ComPPI,HPRD
ITGA2 COL1A1 11359786 11856343 14525934 2156854 25348397 N/A experimental interaction detection,physical interaction,in vitro,in vivo ComPPI,HPRD
VWF COL1A1 14525934 25348397 3490481 N/A experimental interaction detection,physical interaction,in vitro ComPPI,HPRD
TFAP2C COL1A1 24234451 24835590 25348397 physical association two hybrid ComPPI,IntAct
MATN2 COL1A1 12180907 14525934 25348397 N/A experimental interaction detection,physical interaction,in vitro,in vivo ComPPI,HPRD
TIMM44 COL1A1 25348397 N/A physical interaction ComPPI
YAF2 COL1A1 25348397 N/A physical interaction ComPPI
BARD1 COL1A1 25348397 N/A physical interaction ComPPI
ELAVL1 COL1A1 25348397 N/A physical interaction ComPPI
HTRA1 COL1A1 14525934 15101818 25348397 N/A two hybrid,two hybrid ComPPI,HPRD
BMP1 COL1A1 11283002 14525934 25348397 N/A experimental interaction detection,in vivo ComPPI,HPRD
COL7A1 COL1A1 14525934 25348397 9169408 N/A experimental interaction detection,physical interaction,in vitro ComPPI,HPRD
COL1A1 CAPN1 12358155 14525934 25348397 N/A two hybrid,physical interaction,two hybrid ComPPI,HPRD
COL1A1 MMP2 11368514 14525934 25348397 27898060 N/A experimental interaction detection,physical interaction,in vitro ComPPI,HPRD,OmniPath
COL1A1 MMP9 14525934 25348397 9878537 N/A experimental interaction detection,in vivo ComPPI,HPRD
COL1A1 CD93 1377218 14525934 25348397 N/A experimental interaction detection,in vitro ComPPI,HPRD
COL1A1 NID1 14525934 25348397 9733643 N/A experimental interaction detection,physical interaction,in vitro ComPPI,HPRD
COL1A1 ITGA5 25348397 N/A in vitro,in vivo ComPPI
COL1A1 IGFBP3 12735930 14525934 25348397 N/A two hybrid,experimental interaction detection,physical interaction,in vitro,in vivo,two hybrid ComPPI,HPRD
COL1A1 FGF7 11973338 14525934 25348397 N/A experimental interaction detection,in vitro ComPPI,HPRD
COL1A1 PRELP 11847210 14525934 25348397 N/A experimental interaction detection,physical interaction,in vitro ComPPI,HPRD
COL1A1 TMPRSS6 12149247 14525934 25348397 N/A experimental interaction detection,in vitro ComPPI,HPRD
COL1A1 COL5A1 20979576 24234451 25348397 physical association two hybrid ComPPI,IntAct
COL1A1 LOX 21690299 24234451 25348397 physical association two hybrid ComPPI,IntAct
COL1A1 NID2 25348397 N/A physical interaction ComPPI
COL1A1 MAG 25348397 N/A physical interaction ComPPI
COL1A1 ATP13A2 22645275 24234451 25348397 physical association ubiquitin reconstruction,physical interaction ComPPI,IntAct
COL1A1 C12ORF57 25348397 N/A physical interaction ComPPI
COL1A1 BRCA1 25348397 N/A physical interaction ComPPI
COL1A1 DNM3 25348397 N/A physical interaction ComPPI
COL1A1 CD200R1 25348397 N/A physical interaction ComPPI
COL1A1 TMTC4 25348397 N/A physical interaction ComPPI
COL1A1 ERAL1 25348397 N/A physical interaction ComPPI
COL1A1 CAMKMT 25348397 N/A physical interaction ComPPI
COL1A1 MFSD13A 25348397 N/A physical interaction ComPPI
COL1A1 OTUB1 24234451 25348397 26752685 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
COL1A1 P4HA2 25348397 N/A physical interaction ComPPI
COL1A1 PLOD1 25348397 N/A physical interaction ComPPI
COL1A1 RASGEF1B 25348397 N/A physical interaction ComPPI
COL1A1 LPAR1 25348397 N/A physical interaction ComPPI
COL1A1 CYLD 25348397 N/A physical interaction ComPPI
COL1A1 MCPH1 25348397 N/A physical interaction ComPPI
COL1A1 FN1 14525934 20541508 24234451 25290767 25348397 8468356 N/A classical fluorescence spectroscopy,experimental interaction detection,fluorescence polarization spectroscopy,physical interaction ComPPI,HPRD,IntAct
COL1A1 COCH 19013156 24234451 25348397 N/A surface plasmon resonance,surface plasmon resonance array ComPPI,IntAct
COL1A1 PTBP3 22575643 24234451 25348397 association anti bait coimmunoprecipitation ComPPI,IntAct
TGFBI COL1A1 11867580 12034705 14525934 25348397 N/A experimental interaction detection,in vitro ComPPI,HPRD
ZNF16 COL1A1 21874239 24234451 25348397 physical association two hybrid ComPPI,IntAct
COLGALT2 COL1A1 25348397 N/A physical interaction ComPPI
DCN COL1A1 14525934 1468447 9675033 N/A experimental interaction detection HPRD
COL1A1 ITGB1 27898060 7716514 stimulant N/A OmniPath
SP1 COL1A1 19558215 27898060 stimulant N/A OmniPath
COL1A1 DDR1 21044884 21815193 27898060 9659900 stimulant N/A OmniPath
MYB COL1A1 27898060 9989795 stimulant N/A OmniPath
COL1A1 ITGA11 10464311 27898060 stimulant N/A OmniPath
COL1A1 DDR2 12611880 27898060 9659899 stimulant N/A OmniPath
BMP1 COL1A1 11283002 27898060 N/A N/A OmniPath

Visualization