Gene Information gene info

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GENE：SLN

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SLN
FullNmae sarcolipin
LocusType gene with protein product
Status Approved
HGNC_id HGNC:11089
EnsembleID ENSG00000170290
Uniprot O00631

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SLN immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SLN GO:0004857,GO:0005515,GO:0006816,GO:0016020,GO:0016529,GO:0033017,GO:0043086,GO:0043242,GO:0051117,GO:0051924,GO:0070296,GO:0090281,GO:0120162,GO:1901020,GO:1901077,GO:1901877,GO:1901881,GO:1901894,GO:1901895

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
SLN hsa:6588 path:hsa04020 Calcium signaling pathway - Homo sapiens (human)

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
EGR1 SLN 19032775 23180781 physical association anti tag coimmunoprecipitation InnateDB

Source Target Pmid Interactiontype Methods Database
AR SLN 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
CTCF SLN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 SLN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 SLN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 SLN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS SLN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
GATA2 SLN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TAL1 SLN 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
CAMK2A SLN 22135298 phosphorylation N/A PhosphoSite
SLN PLN 25361965 interaction type N/A PTMCode2
PLN SLN 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
LMNA SLN 25348397 N/A physical interaction ComPPI
SLN KASH5 24234451 25348397 25416956 physical association two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
SLN TMEM79 24234451 25348397 25416956 physical association two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
SLN PLN 12032137 12692302 14525934 25348397 N/A experimental interaction detection,physical interaction,in vivo ComPPI,HPRD
SLN ATP2A1 12032137 12692302 14525934 25348397 27898060 9575189 N/A experimental interaction detection,physical interaction,in vivo ComPPI,HPRD,OmniPath
SLN ATP2A2 25348397 N/A physical interaction ComPPI
SLN SYNE4 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
SLN PTPN11 25348397 N/A physical interaction ComPPI
SERCA SLN 23970561 24234451 physical association anti tag coimmunoprecipitation IntAct
CAMK2A SLN 23455424 27898060 N/A N/A OmniPath

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