Gene Information gene info

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GENE：SDF4

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SDF4
FullNmae stromal cell derived factor 4
LocusType gene with protein product
Status Approved
HGNC_id HGNC:24188
EnsembleID ENSG00000078808
Uniprot Q9BRK5

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SDF4 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SDF4 GO:0005509,GO:0005509,GO:0005515,GO:0005737,GO:0005770,GO:0005783,GO:0005796,GO:0005886,GO:0009650,GO:0016020,GO:0017156,GO:0017156,GO:0021549,GO:0032059,GO:0042802,GO:0045444,GO:0045471,GO:0070062,GO:0070625,GO:0099558

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 SDF4 20019798 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
CTCF SDF4 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 SDF4 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 SDF4 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF SDF4 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TP53 SDF4 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00005651EE SDF4 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00000451A1 SDF4 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00000A2C49 SDF4 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00002E728C SDF4 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00003D5391 SDF4 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00004929F1 SDF4 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00002373FD SDF4 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS000035D2F9 SDF4 23592263 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
MAD2L2 SDF4 24234451 25348397 29656893 association anti tag coimmunoprecipitation ComPPI,IntAct
TTR SDF4 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
CDKN1A SDF4 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
TK1 SDF4 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
ZNF512B SDF4 15231748 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
KEAP1 SDF4 25348397 N/A physical interaction ComPPI
SMN1 SDF4 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
PTPN18 SDF4 25348397 N/A physical interaction ComPPI
PTPRO SDF4 25348397 N/A physical interaction ComPPI
ARAF SDF4 24234451 25348397 25852190 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
FHL2 SDF4 25348397 N/A physical interaction ComPPI
PTPN22 SDF4 25348397 N/A physical interaction ComPPI
CUL3 SDF4 25348397 N/A physical interaction ComPPI
CLU SDF4 25348397 N/A physical interaction ComPPI
YWHAZ SDF4 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
TUBG1 SDF4 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
PLD2 SDF4 25348397 N/A physical interaction ComPPI
NR1I2 SDF4 21988832 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
ILK SDF4 23455922 24234451 25348397 25852190 association anti tag coimmunoprecipitation,physical interaction,tandem affinity purification ComPPI,IntAct
ITGB3BP SDF4 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
HSPA5 SDF4 24189400 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
MYC SDF4 21150319 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction,tandem affinity purification ComPPI,IntAct
ERF SDF4 25348397 N/A physical interaction ComPPI
IQGAP2 SDF4 25348397 N/A physical interaction ComPPI
RAP1B SDF4 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
BRCA2 SDF4 25348397 N/A physical interaction ComPPI
RCC1 SDF4 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
RPA2 SDF4 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
ABCE1 SDF4 25348397 N/A physical interaction ComPPI
SMC1A SDF4 25348397 N/A physical interaction ComPPI
SMC3 SDF4 25348397 N/A physical interaction ComPPI
ATP2B2 SDF4 25348397 N/A physical interaction ComPPI
MME SDF4 17342744 24234451 25348397 association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
ZMYM2 SDF4 25348397 N/A physical interaction ComPPI
FOXF2 SDF4 25348397 N/A physical interaction ComPPI
SNCA SDF4 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
PLK4 SDF4 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
RGPD5 SDF4 25348397 N/A physical interaction ComPPI
KIF2C SDF4 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
MAPRE2 SDF4 25348397 N/A physical interaction ComPPI
RICTOR SDF4 25348397 N/A physical interaction ComPPI
POU5F1 SDF4 25348397 N/A physical interaction ComPPI
WIPI2 SDF4 20562859 24234451 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
KSR1 SDF4 25348397 N/A physical interaction ComPPI
LRFN1 SDF4 25348397 N/A physical interaction ComPPI
APP SDF4 25348397 N/A physical interaction ComPPI
ARFGEF2 SDF4 25348397 N/A physical interaction ComPPI
RIPK4 SDF4 24234451 25348397 26972000 association anti tag coimmunoprecipitation ComPPI,IntAct
ANXA7 SDF4 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
SDF4 IFT122 25348397 N/A physical interaction ComPPI
SDF4 ACAD11 25348397 N/A physical interaction ComPPI
SDF4 SMG8 25348397 N/A physical interaction ComPPI
SDF4 CHST11 25348397 N/A physical interaction ComPPI
SDF4 THOC2 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct

Visualization










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