Gene Information gene info

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GENE：NOVA1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol NOVA1
FullNmae NOVA alternative splicing regulator 1
LocusType gene with protein product
Status Approved
HGNC_id HGNC:7886
EnsembleID ENSG00000139910
Uniprot P51513

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
NOVA1 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
NOVA1 GO:0000381,GO:0000381,GO:0000398,GO:0003723,GO:0003729,GO:0003729,GO:0003730,GO:0005515,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006396,GO:0007399,GO:0008380,GO:0043231,GO:0120163,GO:1990825,GO:1990825

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
SRPK1 NOVA1 23180781 23602568 phosphorylation reaction protein kinase assay InnateDB

Source Target Pmid Interactiontype Methods Database
YBX1 NOVA1 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 NOVA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA NOVA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF NOVA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 NOVA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 NOVA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
GATA2 NOVA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A NOVA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF NOVA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 NOVA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TRIM28 NOVA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000338542 NOVA1 20584899 rna interference,inhibition experimental interaction detection miRSponge
URS00000254A6 NOVA1 18684991 rna interference,inhibition western blot,quantitative reverse transcription pcr miRSponge
URS00000254A6 NOVA1 18684991 25416803 mrna cleavage,inhibition western blot,quantitative reverse transcription pcr TarBase
URS0000237AF9 NOVA1 18185580 25416803 mrna cleavage,inhibition array technology TarBase
URS0000338542 NOVA1 20584899 25416803 mrna cleavage,inhibition experimental interaction detection,experimental interaction detection TarBase
URS000003FD55 NOVA1 25416803 26391641 mrna cleavage,inhibition western blot,quantitative reverse transcription pcr,miRNA interference luciferase reporter assay TarBase
URS000050CCE0 NOVA1 25416803 26673617 mrna cleavage,inhibition quantitative reverse transcription pcr,immunohistochemistry TarBase

Source Target Pmid Interactiontype Methods Database
PCBP1 NOVA1 14525934 16713569 24234451 25348397 physical association two hybrid,physical interaction,two hybrid ComPPI,HPRD,IntAct
TP53BP1 NOVA1 24234451 25348397 29656893 association proximity-dependent biotin identification ComPPI,IntAct
FOXB1 NOVA1 24234451 25348397 25609649 association physical interaction,tandem affinity purification ComPPI,IntAct
SRPK1 NOVA1 23602568 24234451 25348397 phosphorylation reaction physical interaction,protein kinase assay ComPPI,IntAct
FOXE1 NOVA1 24234451 25348397 25609649 association physical interaction,tandem affinity purification ComPPI,IntAct
SMARCC2 NOVA1 14525934 16169070 24234451 25348397 physical association two hybrid,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
NOVA1 RPP14 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
NOVA1 APP 25348397 N/A physical interaction ComPPI
NOVA1 COQ3 25348397 N/A physical interaction ComPPI
NOVA1 FOXL1 24234451 25348397 25609649 association physical interaction,tandem affinity purification ComPPI,IntAct
NOVA1 FOXP3 24234451 25348397 25609649 association physical interaction,tandem affinity purification ComPPI,IntAct
NOVA1 NOVA2 25348397 N/A physical interaction ComPPI
NOVA1 NOVA1 10368286 14525934 N/A experimental interaction detection HPRD
NOVA1 GABRG2 24234451 27733149 physical association anti bait coimmunoprecipitation IntAct

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