Gene Information gene info

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GENE：HOXD3

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol HOXD3
FullNmae homeobox D3
LocusType gene with protein product
Status Approved
HGNC_id HGNC:5137
EnsembleID ENSG00000128652
Uniprot P31249

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
HOXD3 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
HOXD3 GO:0000785,GO:0000977,GO:0000978,GO:0000981,GO:0000981,GO:0001228,GO:0005515,GO:0005634,GO:0005634,GO:0005654,GO:0006351,GO:0006357,GO:0007160,GO:0007219,GO:0009952,GO:0009952,GO:0010628,GO:0016235,GO:0016604,GO:0021615,GO:0030878,GO:0045666,GO:0045944,GO:0048704,GO:0048704,GO:0051216,GO:1990837

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
HOXD3 CREB1 18160048 23180781 physical association anti tag coimmunoprecipitation InnateDB
LYL1 HOXD3 18160048 23180781 physical association anti tag coimmunoprecipitation InnateDB

Source Target Pmid Interactiontype Methods Database
MYC HOXD3 12747840 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
YBX1 HOXD3 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 HOXD3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA HOXD3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF HOXD3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 HOXD3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ETS1 HOXD3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A HOXD3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
PRDM14 HOXD3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TRIM28 HOXD3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ZNF263 HOXD3 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00002075FA HOXD3 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS0000001EB3 HOXD3 20371350 23592263 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00004E008F HOXD3 20371350 23592263 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000078918 HOXD3 20371350 23592263 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000030F801 HOXD3 20371350 23592263 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000032835F HOXD3 20371350 23592263 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000237AF9 HOXD3 23592263 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00004DA9DB HOXD3 25416803 27244890 mrna cleavage,inhibition experimental interaction detection,western blot,chromatin immunoprecipitation assay,quantitative reverse transcription pcr,immunohistochemistry,miRNA interference luciferase reporter assay TarBase
URS00000C403E HOXD3 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000015A0D9 HOXD3 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000047A8F HOXD3 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000077DDE HOXD3 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000913AC HOXD3 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000214763 HOXD3 25416803 26701625 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
SMARCD1 HOXD3 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
HMGB1 HOXD3 25348397 N/A physical interaction ComPPI
DDB1 HOXD3 25348397 N/A physical interaction ComPPI
ALX4 HOXD3 25348397 N/A physical interaction ComPPI
HOXC8 HOXD3 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
HOXD3 NFKBID 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct

Source Target Pmid Interactiontype Methods Database
URS00009B66FF HOXD3 27087310 direct interaction,inhibition N/A NPInter

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