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GENE：BANF1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol BANF1
FullNmae BAF nuclear assembly factor 1
LocusType gene with protein product
Status Approved
HGNC_id HGNC:17397
EnsembleID ENSG00000175334
Uniprot O75531

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
BANF1 mitotic_cd 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
BANF1 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
BANF1 GO:0000785,GO:0000793,GO:0003690,GO:0005515,GO:0005515,GO:0005634,GO:0005634,GO:0005635,GO:0005654,GO:0005654,GO:0005737,GO:0005829,GO:0005829,GO:0006325,GO:0006979,GO:0007084,GO:0009615,GO:0010836,GO:0015074,GO:0032480,GO:0042802,GO:0042803,GO:0045071,GO:0045824

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ERBIN BANF1 15123239 23180781 physical association peptide array InnateDB

Source Target Pmid Interactiontype Methods Database
CEBPA BANF1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF BANF1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ETS1 BANF1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A BANF1 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00004DA9DB BANF1 25416803 25658920 mrna cleavage,inhibition western blot,quantitative reverse transcription pcr,miRNA interference luciferase reporter assay TarBase

Source Target Pmid Interactiontype Methods Database
VRK1 BANF1 22135298 25361965 interaction type,phosphorylation N/A PhosphoSite,PTMCode2
VRK2 BANF1 22135298 phosphorylation N/A PhosphoSite
VRK3 BANF1 22135298 phosphorylation N/A PhosphoSite
BANF1 VRK1 25361965 interaction type N/A PTMCode2
HMGA1 BANF1 25361965 interaction type N/A PTMCode2
BANF1 HMGA1 25361965 interaction type N/A PTMCode2
DDB1 BANF1 25361965 interaction type N/A PTMCode2
BANF1 DDB1 25361965 interaction type N/A PTMCode2
BANF1 SMARCE1 25361965 interaction type N/A PTMCode2
SMARCE1 BANF1 25361965 interaction type N/A PTMCode2
BANF1 LMNA 25361965 interaction type N/A PTMCode2
LMNA BANF1 25361965 interaction type N/A PTMCode2
BANF1 EMD 25361965 interaction type N/A PTMCode2
EMD BANF1 25361965 interaction type N/A PTMCode2
BANF1 RBBP4 25361965 interaction type N/A PTMCode2
RBBP4 BANF1 25361965 interaction type N/A PTMCode2
BANF1 CUL4A 25361965 interaction type N/A PTMCode2
CUL4A BANF1 25361965 interaction type N/A PTMCode2
BANF1 PSIP1 25361965 interaction type N/A PTMCode2
PSIP1 BANF1 25361965 interaction type N/A PTMCode2
BANF1 EHMT2 25361965 interaction type N/A PTMCode2
EHMT2 BANF1 25361965 interaction type N/A PTMCode2
BANF1 ACTL6A 25361965 interaction type N/A PTMCode2
ACTL6A BANF1 25361965 interaction type N/A PTMCode2
ZNF428 BANF1 25361965 interaction type N/A PTMCode2
BANF1 ZNF428 25361965 interaction type N/A PTMCode2
SMARCA2 BANF1 25361965 interaction type N/A PTMCode2
BANF1 SMARCA2 25361965 interaction type N/A PTMCode2
SNRPD3 BANF1 25361965 interaction type N/A PTMCode2
BANF1 SNRPD3 25361965 interaction type N/A PTMCode2
DDB2 BANF1 25361965 interaction type N/A PTMCode2
BANF1 DDB2 25361965 interaction type N/A PTMCode2
SMARCC2 BANF1 25361965 interaction type N/A PTMCode2
BANF1 SMARCC2 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
SMARCE1 BANF1 25348397 N/A physical interaction ComPPI
HNRNPC BANF1 25348397 N/A physical interaction ComPPI
DPY30 BANF1 25348397 N/A physical interaction ComPPI
CRX BANF1 12215455 25348397 27898060 N/A two hybrid,physical interaction,in vitro,in vivo ComPPI,OmniPath
CD2BP2 BANF1 25348397 N/A physical interaction ComPPI
EMD BANF1 12163176 24234451 25348397 25910212 physical association far western blotting,physical interaction,two hybrid array,in vitro,in vivo,two hybrid prey pooling approach,two hybrid bait and prey pooling approach,validated two hybrid ComPPI,IntAct
SET BANF1 25348397 N/A physical interaction ComPPI
LMNA BANF1 24234451 25348397 29568061 association pull down,physical interaction ComPPI,IntAct
BMI1 BANF1 25348397 N/A physical interaction ComPPI
TUFM BANF1 25348397 N/A physical interaction ComPPI
AIM2 BANF1 24234451 25348397 25665578 association anti tag coimmunoprecipitation ComPPI,IntAct
CDK5RAP3 BANF1 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
EHMT2 BANF1 19759913 22127260 25348397 27898060 N/A physical interaction ComPPI,OmniPath
ERBIN BANF1 25348397 N/A physical interaction ComPPI
RPL10 BANF1 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
CD81 BANF1 24234451 25348397 26212323 association anti bait coimmunoprecipitation ComPPI,IntAct
CBX1 BANF1 25348397 N/A physical interaction ComPPI
HMGA1 BANF1 25348397 N/A physical interaction ComPPI
FLNA BANF1 25348397 N/A physical interaction ComPPI
DLD BANF1 24234451 25348397 29128334 association cross-linking study,physical interaction ComPPI,IntAct
CANX BANF1 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
PARP1 BANF1 25348397 N/A physical interaction ComPPI
APTX BANF1 25348397 N/A physical interaction ComPPI
HSPA1A BANF1 25348397 N/A physical interaction ComPPI
HSPA1B BANF1 25348397 N/A physical interaction ComPPI
SUB1 BANF1 25348397 N/A physical interaction ComPPI
EVC2 BANF1 25348397 N/A physical interaction ComPPI
VDAC1 BANF1 24234451 25348397 29128334 association cross-linking study,physical interaction ComPPI,IntAct
PKM BANF1 25348397 N/A physical interaction ComPPI
TMPO BANF1 10393804 22939629 25348397 27898060 N/A two hybrid,physical interaction,in vitro ComPPI,OmniPath
RBBP4 BANF1 25348397 N/A physical interaction ComPPI
SNRPD3 BANF1 25348397 N/A physical interaction ComPPI
SOX4 BANF1 25348397 N/A physical interaction ComPPI
CUL4A BANF1 25348397 N/A physical interaction ComPPI
HDAC2 BANF1 25348397 N/A physical interaction ComPPI
BANF1 TMPO 25348397 N/A physical interaction ComPPI
BANF1 DDB1 25348397 N/A physical interaction ComPPI
BANF1 DDB2 25348397 N/A physical interaction ComPPI
BANF1 CHD4 25348397 N/A physical interaction ComPPI
BANF1 SMOC2 25348397 N/A physical interaction ComPPI
BANF1 MDC1 25348397 N/A physical interaction ComPPI
BANF1 CBX3 25348397 N/A physical interaction ComPPI
BANF1 RECQL 25348397 N/A physical interaction ComPPI
BANF1 NUMA1 25348397 N/A physical interaction ComPPI
BANF1 ACTL6A 25348397 N/A physical interaction ComPPI
BANF1 HDAC1 25348397 N/A physical interaction ComPPI
BANF1 ACIN1 25348397 N/A physical interaction ComPPI
BANF1 CHAF1B 25348397 N/A physical interaction ComPPI
BANF1 MTA2 25348397 N/A physical interaction ComPPI
BANF1 RBBP7 25348397 N/A physical interaction ComPPI
BANF1 SMARCC2 25348397 N/A physical interaction ComPPI
BANF1 TRA2B 25348397 N/A physical interaction ComPPI
BANF1 ATP5PF 25348397 N/A physical interaction ComPPI
BANF1 LMNB2 25348397 N/A physical interaction ComPPI
BANF1 SMARCA2 25348397 N/A physical interaction ComPPI
BANF1 PAEP 25348397 N/A physical interaction ComPPI
BANF1 BCL7C 25348397 N/A physical interaction ComPPI
BANF1 PSIP1 25348397 N/A physical interaction ComPPI
BANF1 ZNF428 25348397 N/A physical interaction ComPPI
BANF1 HNRNPD 25348397 N/A physical interaction ComPPI
BANF1 KRT16 25348397 N/A physical interaction ComPPI
BANF1 XPC 25348397 N/A physical interaction ComPPI
BANF1 DPF2 25348397 N/A physical interaction ComPPI
BANF1 ATP6V1B1 25348397 N/A physical interaction ComPPI
BANF1 FBL 25348397 N/A physical interaction ComPPI
BANF1 LUC7L3 25348397 N/A physical interaction ComPPI
BANF1 LUZP4 25348397 N/A physical interaction ComPPI
BANF1 ASPSCR1 25348397 N/A physical interaction ComPPI
BANF1 DNAJC2 25348397 N/A physical interaction ComPPI
BANF1 CNTROB 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
BANF1 SPICE1 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
BANF1 FOXL2 25348397 N/A physical interaction ComPPI
BANF1 EYA1 25348397 N/A physical interaction ComPPI
BANF1 STYX 25348397 N/A physical interaction ComPPI
BANF1 COX15 24234451 25348397 29128334 association cross-linking study,physical interaction ComPPI,IntAct
BANF1 SDHA 24234451 25348397 29128334 association cross-linking study,physical interaction ComPPI,IntAct
BANF1 SOAT1 24234451 25348397 29128334 association cross-linking study,physical interaction ComPPI,IntAct
BANF1 SOD1 24234451 25348397 29128334 association cross-linking study,physical interaction ComPPI,IntAct
BANF1 G3BP1 25348397 N/A physical interaction ComPPI
BANF1 H1-1 25348397 N/A physical interaction ComPPI
BANF1 H1-2 25348397 N/A physical interaction ComPPI
BANF1 HLA-B 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
BANF1 ATP6V1A 21674799 24234451 25348397 association anti bait coimmunoprecipitation ComPPI,IntAct
BANF1 PTBP3 22575643 24234451 25348397 association anti bait coimmunoprecipitation ComPPI,IntAct
BANF1 BET1 24234451 25348397 29568061 association pull down ComPPI,IntAct
BANF1 RAB9A 24234451 25348397 29568061 association pull down ComPPI,IntAct
H3C1 BANF1 25348397 N/A physical interaction ComPPI
BANF1 BANF1 16155580 24234451 N/A cosedimentation in solution,molecular sieving,x-ray crystallography IntAct
METTL14 BANF1 24234451 29507755 association anti tag coimmunoprecipitation IntAct
BANF1 PWWP2A 24234451 30021884 physical association cross-linking study IntAct
BANF1 DDHD1 24234451 30021884 physical association cross-linking study IntAct
TTK BANF1 16371512 16495336 27898060 N/A N/A OmniPath
PPP4C BANF1 16495336 24265311 27898060 stimulant N/A OmniPath
ERBIN BANF1 15123239 27898060 N/A N/A OmniPath
VRK1 BANF1 16371512 16495336 24265311 25899223 27898060 inhibition N/A OmniPath
VRK2 BANF1 16371512 16495336 24600006 24945635 27898060 inhibition N/A OmniPath

Visualization










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