GENE:BCL9
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | BCL9 |
| FullNmae | BCL9 transcription coactivator |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:1008 |
| EnsembleID | ENSG00000116128 |
| Uniprot | O00512 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| BCL9 | immunogenic | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| BCL9 | GO:0003713,GO:0005515,GO:0005654,GO:0005801,GO:0006366,GO:0008013,GO:0014908,GO:0016528,GO:0035019,GO:0035914,GO:0045445,GO:0045944,GO:0060070,GO:1990907,GO:1990907,GO:1990907 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| AR | BCL9 | 20610535 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| ESR1 | BCL9 | 19376833 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| ESR2 | BCL9 | 19376833 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| ETS1 | BCL9 | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| FOXP3 | BCL9 | 20554955 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| PRDM14 | BCL9 | 18971253 20953172 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| SMARCA4 | BCL9 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CTCF | BCL9 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EGR1 | BCL9 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXA1 | BCL9 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOS | BCL9 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| HNF4A | BCL9 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| RUNX1 | BCL9 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TRIM28 | BCL9 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS0000122ED0 | BCL9 | 19088304 25416803 | mrna cleavage,inhibition | array technology | TarBase |
| URS000075ABF4 | BCL9 | 23622248 25416803 | mrna cleavage,inhibition | clash | TarBase |
| URS0000137EDE | BCL9 | 22024689 25416803 | mrna cleavage,inhibition | experimental interaction detection,quantitative reverse transcription pcr,miRNA interference luciferase reporter assay | TarBase |
| URS0000065D58 | BCL9 | 24599134 25416803 | mrna cleavage,inhibition | experimental interaction detection,experimental interaction detection,western blot,quantitative reverse transcription pcr,immunohistochemistry,miRNA interference luciferase reporter assay | TarBase |
| URS00002152A8 | BCL9 | 24599134 25416803 | mrna cleavage,inhibition | experimental interaction detection,experimental interaction detection,western blot,quantitative reverse transcription pcr,immunohistochemistry,miRNA interference luciferase reporter assay | TarBase |
| URS000005CF5F | BCL9 | 24599134 25416803 | mrna cleavage,inhibition | experimental interaction detection,experimental interaction detection,western blot,quantitative reverse transcription pcr,immunohistochemistry,miRNA interference luciferase reporter assay | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| BCL9 | CTNNB1 | 25361965 | interaction type | N/A | PTMCode2 |
| CTNNB1 | BCL9 | 25361965 | interaction type | N/A | PTMCode2 |
| BCL9 | TCF4 | 25361965 | interaction type | N/A | PTMCode2 |
| TCF4 | BCL9 | 25361965 | interaction type | N/A | PTMCode2 |
| BCL9 | CDC73 | 25361965 | interaction type | N/A | PTMCode2 |
| CDC73 | BCL9 | 25361965 | interaction type | N/A | PTMCode2 |
| BCL9 | PYGO2 | 25361965 | interaction type | N/A | PTMCode2 |
| PYGO2 | BCL9 | 25361965 | interaction type | N/A | PTMCode2 |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| CDC73 | BCL9 | 16630820 17113272 24234451 25348397 | association,physical association | anti bait coimmunoprecipitation,anti tag coimmunoprecipitation | ComPPI,IntAct |
| EWSR1 | BCL9 | 25348397 | N/A | physical interaction | ComPPI |
| CTNNB1 | BCL9 | 11955446 14525934 15294866 24234451 25348397 | physical association | two hybrid,experimental interaction detection,pull down,physical interaction,in vivo,two hybrid | ComPPI,HPRD,IntAct |
| WWOX | BCL9 | 25348397 | N/A | physical interaction | ComPPI |
| TRIM25 | BCL9 | 25348397 | N/A | physical interaction | ComPPI |
| ELAVL1 | BCL9 | 25348397 | N/A | physical interaction | ComPPI |
| PYGO1 | BCL9 | 11955446 14525934 14612447 18498752 24234451 25348397 | physical association | two hybrid,experimental interaction detection,molecular sieving,pull down,x-ray crystallography,physical interaction,in vitro,in vivo,two hybrid | ComPPI,HPRD,IntAct |
| BCL9 | PYGO2 | 11955446 14525934 14612447 17113272 21399610 24234451 25348397 | physical association | anti tag coimmunoprecipitation,two hybrid,experimental interaction detection,physical interaction,in vitro,in vivo,two hybrid | ComPPI,HPRD,IntAct |
| BCL9 | TCF4 | 11955446 24234451 25348397 | physical association | pull down | ComPPI,IntAct |
| ARM | BCL9 | 11955446 17113272 24234451 | physical association | two hybrid | IntAct |
| PYGO | BCL9 | 11955446 24234451 | physical association | two hybrid | IntAct |
| BCL9 | CTNNB1 | 11955446 15208637 15294866 1705246 17052462 27898060 | stimulant | N/A | OmniPath |
| BCL9 | PYGO1 | 11955446 14612447 18498752 27898060 | stimulant | N/A | OmniPath |
