Gene Information gene info

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GENE：COL12A1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol COL12A1
FullNmae collagen type XII alpha 1 chain
LocusType gene with protein product
Status Approved
HGNC_id HGNC:2188
EnsembleID ENSG00000111799
Uniprot Q99715

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
COL12A1 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
COL12A1 GO:0005576,GO:0005576,GO:0005595,GO:0005615,GO:0005788,GO:0007155,GO:0030020,GO:0030020,GO:0030199,GO:0035987,GO:0035987,GO:0062023,GO:0062023,GO:0070062,GO:1903561

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
COL12A1 hsa:1303 path:hsa04974 Protein digestion and absorption - Homo sapiens (human)

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR COL12A1 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
GATA1 COL12A1 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 COL12A1 18971253 19941826 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
TP73 COL12A1 19558638 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
FOXP3 COL12A1 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 COL12A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA COL12A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF COL12A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 COL12A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 COL12A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A COL12A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TRIM28 COL12A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ZNF263 COL12A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00000ED600 COL12A1 20215506 25416803 mrna cleavage,inhibition array technology TarBase
URS000003ABC4 COL12A1 23939832 25416803 mrna cleavage,inhibition experimental interaction detection TarBase
URS00000AD002 COL12A1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00003BD367 COL12A1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS000054A671 COL12A1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS000033EBB8 COL12A1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS000043D2C1 COL12A1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00004BC299 COL12A1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000075ABF4 COL12A1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00002E1509 COL12A1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00002E628F COL12A1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000136174 COL12A1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000076B539 COL12A1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000008C563 COL12A1 23824327 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
ID1 COL12A1 25348397 N/A physical interaction ComPPI
MMP2 COL12A1 25348397 N/A physical interaction ComPPI
MMP9 COL12A1 25348397 N/A physical interaction ComPPI
COL12A1 MYBPC2 23414517 24234451 25348397 physical association two hybrid fragment pooling approach ComPPI,IntAct

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