Gene Information gene info

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GENE：COL6A3

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol COL6A3
FullNmae collagen type VI alpha 3 chain
LocusType gene with protein product
Status Approved
HGNC_id HGNC:2213
EnsembleID ENSG00000163359
Uniprot P12111

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
COL6A3 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
COL6A3 GO:0004867,GO:0005576,GO:0005576,GO:0005589,GO:0005615,GO:0005615,GO:0005788,GO:0007155,GO:0007517,GO:0009749,GO:0030020,GO:0030020,GO:0031012,GO:0042383,GO:0062023,GO:0062023,GO:0062023,GO:0070062,GO:1903561

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
COL6A3 hsa:1293 path:hsa04151 PI3K-Akt signaling pathway - Homo sapiens (human)
COL6A3 hsa:1293 path:hsa04510 Focal adhesion - Homo sapiens (human)
COL6A3 hsa:1293 path:hsa04512 ECM-receptor interaction - Homo sapiens (human)
COL6A3 hsa:1293 path:hsa04974 Protein digestion and absorption - Homo sapiens (human)
COL6A3 hsa:1293 path:hsa05165 Human papillomavirus infection - Homo sapiens (human)

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR COL6A3 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 COL6A3 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 COL6A3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF COL6A3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 COL6A3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 COL6A3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 COL6A3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
GATA2 COL6A3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
PRDM14 COL6A3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 COL6A3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
SPI1 COL6A3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TAL1 COL6A3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TP53 COL6A3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
SMAD3 COL6A3 N/A trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
MMP2 COL6A3 25361965 interaction type N/A PTMCode2
COL6A3 MMP2 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
PDIA3 COL6A3 17170699 24234451 25348397 disulfide bond anti tag coimmunoprecipitation ComPPI,IntAct
DYSF COL6A3 23414517 24234451 25348397 physical association two hybrid fragment pooling approach ComPPI,IntAct
MMP2 COL6A3 14525934 25348397 27898060 8862926 N/A experimental interaction detection,in vitro ComPPI,HPRD,OmniPath
COL6A3 COL5A1 20979576 24234451 25348397 physical association two hybrid ComPPI,IntAct
COL6A3 GAN 25348397 N/A physical interaction ComPPI

Visualization










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