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GENE：RAB3IP

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol RAB3IP
FullNmae RAB3A interacting protein
LocusType gene with protein product
Status Approved
HGNC_id HGNC:16508
EnsembleID ENSG00000127328
Uniprot Q96QF0

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
RAB3IP immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
RAB3IP GO:0005085,GO:0005085,GO:0005515,GO:0005634,GO:0005815,GO:0005829,GO:0005829,GO:0006612,GO:0006887,GO:0030027,GO:0048471,GO:0051020,GO:0051490,GO:0060271,GO:0070319,GO:0097711,GO:1990635

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 RAB3IP 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA2 RAB3IP 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 RAB3IP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA RAB3IP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF RAB3IP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 RAB3IP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 RAB3IP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF RAB3IP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TRIM28 RAB3IP 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00005651EE RAB3IP 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00001CC379 RAB3IP 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS0000171CD1 RAB3IP 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000041CB9C RAB3IP 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000040EE1D RAB3IP 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00000F0F49 RAB3IP 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000007D64A RAB3IP 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS0000475586 RAB3IP 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000019F055 RAB3IP 24374217 25416803 mrna cleavage,inhibition clip TarBase
URS0000338542 RAB3IP 22100165 25416803 mrna cleavage,inhibition clip TarBase
URS00004B83FE RAB3IP 22100165 25416803 mrna cleavage,inhibition clip TarBase
URS00003758F0 RAB3IP 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00003003B4 RAB3IP 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00000F6E49 RAB3IP 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS0000237AF9 RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001DE669 RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000005CF5F RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000065D58 RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000008B558 RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00002F3336 RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000166778 RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000006BE7D RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00004900F1 RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000024B619 RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001F9A0F RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00004F4657 RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000077AED RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000029979D RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000157F5 RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000031E12 RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001941B8 RAB3IP 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000039E1E1 RAB3IP 25416803 26701625 27418678 mrna cleavage,inhibition clip TarBase
URS00000600E6 RAB3IP 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000016FD1A RAB3IP 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002075FA RAB3IP 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000021D7C8 RAB3IP 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000042E1F RAB3IP 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002B3783 RAB3IP 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000070CD2 RAB3IP 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000346991 RAB3IP 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000027080C RAB3IP 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000041E949 RAB3IP 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000508C13 RAB3IP 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000018D2BE RAB3IP 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000298BA3 RAB3IP 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000021D08 RAB3IP 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000DDD35 RAB3IP 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000184017 RAB3IP 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS00005ACA7C RAB3IP 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS000000EF0B RAB3IP 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS0000047A8F RAB3IP 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS00003E226A RAB3IP 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS0000078918 RAB3IP 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS0000214763 RAB3IP 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS00005ECFE5 RAB3IP 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS00001CF056 RAB3IP 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS000075A608 RAB3IP 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS000075B538 RAB3IP 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS00002B7450 RAB3IP 25416803 27418678 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
STK38 RAB3IP 22135298 phosphorylation N/A PhosphoSite
STK38L RAB3IP 22135298 phosphorylation N/A PhosphoSite

Source Target Pmid Interactiontype Methods Database
CHCHD3 RAB3IP 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
PPL RAB3IP 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
FAM110A RAB3IP 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
CEP43 RAB3IP 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
TRAPPC6A RAB3IP 21273506 24234451 25348397 25416956 association,physical association physical interaction,two hybrid array,tandem affinity purification,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
RAB3A RAB3IP 14525934 24234451 25348397 25416956 7532276 physical association two hybrid,experimental interaction detection,physical interaction,two hybrid array,in vitro,two hybrid prey pooling approach,validated two hybrid,two hybrid ComPPI,HPRD,IntAct
EDC3 RAB3IP 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
FAM53C RAB3IP 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
KRT40 RAB3IP 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
PLOD3 RAB3IP 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
CBY1 RAB3IP 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB8A RAB3IP 12221131 123217 14525934 21273506 24234451 25348397 26824392 27173435 association,physical association anti tag coimmunoprecipitation,two hybrid,pull down,physical interaction,tandem affinity purification,gdp/gtp exchange assay,inference by socio-affinity scoring,two hybrid ComPPI,HPRD,IntAct
ARAF RAB3IP 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
GAB2 RAB3IP 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
PFKFB2 RAB3IP 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
MVP RAB3IP 25348397 N/A physical interaction ComPPI
MAGI1 RAB3IP 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
EPN2 RAB3IP 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
HSPA1A RAB3IP 21273506 24234451 25348397 association tandem affinity purification ComPPI,IntAct
HSPA1B RAB3IP 25348397 N/A tandem affinity purification ComPPI
PHLDB2 RAB3IP 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
HNRNPL RAB3IP 25348397 N/A physical interaction ComPPI
PDLIM7 RAB3IP 24234451 25348397 27173435 association,physical association physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
RAB3IL1 RAB3IP 14525934 16189514 19060904 24234451 25348397 25416956 27173435 association,physical association two hybrid,physical interaction,two hybrid array,two hybrid pooling approach,two hybrid fragment pooling approach,tandem affinity purification,two hybrid prey pooling approach,validated two hybrid,inference by socio-affinity scoring,two hybrid ComPPI,HPRD,IntAct
RAB3IP SSX2 12007189 14525934 24234451 25348397 25416956 physical association two hybrid,experimental interaction detection,physical interaction,two hybrid array,in vitro,two hybrid prey pooling approach,validated two hybrid,two hybrid ComPPI,HPRD,IntAct
RAB3IP RAB3D 14525934 25348397 7532276 N/A two hybrid,experimental interaction detection,in vitro,in vivo,two hybrid ComPPI,HPRD
RAB3IP RAB8B 12221131 14525934 25348397 N/A two hybrid,two hybrid ComPPI,HPRD
RAB3IP SUV39H2 23455924 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
RAB3IP SFN 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
RAB3IP NAA10 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
RAB3IP BANP 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
RAB3IP ZNF410 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
RAB3IP RUFY1 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
RAB3IP FAM124A 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
RAB3IP ZC3H3 25348397 N/A physical interaction ComPPI
RAB3IP CCDC146 25348397 N/A physical interaction ComPPI
RAB3IP PCMT1 25348397 N/A physical interaction ComPPI
RAB3IP TXNDC5 25348397 N/A physical interaction ComPPI
RAB3IP GDF5 25348397 N/A physical interaction ComPPI
RAB3IP TRAF2 25348397 N/A physical interaction ComPPI
RAB3IP YWHAE 24234451 25348397 27173435 association,physical association physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP TRAPPC9 21273506 24234451 25348397 27173435 colocalization,association,physical association molecular sieving,physical interaction,confocal microscopy,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP TRAPPC1 21273506 24234451 25348397 27173435 association,physical association physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP TRAPPC3 21273506 24234451 25348397 27173435 association,physical association molecular sieving,physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP TRAPPC4 21273506 24234451 25348397 27173435 association,physical association anti tag coimmunoprecipitation,molecular sieving,physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP TRAPPC2L 21273506 24234451 25348397 27173435 association,physical association physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP TMEM102 21273506 24234451 25348397 27173435 association,physical association physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP TRAPPC10 21273506 24234451 25348397 27173435 colocalization,association,physical association anti tag coimmunoprecipitation,molecular sieving,physical interaction,confocal microscopy,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP MB21D2 24234451 25348397 27173435 association,physical association physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP TBC1D25 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP CCNYL1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP ANKRD34A 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP USP21 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP FAM110B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP CDK16 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP CDC25B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP AGAP1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP SYDE1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP SH3BP4 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP SRSF12 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP AFDN 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP ZNF638 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP CDK18 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP DCLK1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP TESK2 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP LIMA1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP KLC3 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP KIAA0930 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP PDZD11 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP MAP3K2 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP PLEKHA5 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP USP8 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP NUMBL 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP PAK4 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP PI4KB 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP SIPA1L1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP EIF4E2 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP REEP4 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP SRGAP2 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP AKT1S1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP MAPKAP1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP LMO7 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP RASSF8 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP BAIAP2 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP MELK 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP SH3PXD2A 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP CEP170 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP DCAF7 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP RAB11A 21273506 24234451 25348397 colocalization,physical association two hybrid,isothermal titration calorimetry,pull down,x-ray crystallography,physical interaction,fluorescence microscopy ComPPI,IntAct
RAB3IP BBS1 20308558 24234451 25348397 physical association anti bait coimmunoprecipitation,anti tag coimmunoprecipitation,pull down,physical interaction ComPPI,IntAct
RAB3IP RAB11FIP3 25348397 N/A pull down,physical interaction ComPPI
RAB3IP BBS4 17574030 24234451 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
RAB3IP TRAPPC2 21273506 24234451 25348397 association,physical association anti tag coimmunoprecipitation,molecular sieving,tandem affinity purification ComPPI,IntAct
RAB3IP TRAPPC6B 21273506 24234451 25348397 association tandem affinity purification ComPPI,IntAct
RAB3IP RAB11B 21273506 24234451 25348397 colocalization confocal microscopy ComPPI,IntAct
ARF4 RAB3IP 25348397 N/A pull down,pull down,physical interaction ComPPI
TRAPPC5 RAB3IP 21273506 24234451 25348397 association tandem affinity purification ComPPI,IntAct
H1-1 RAB3IP 24234451 30021884 physical association cross-linking study IntAct
IZUMO4 RAB3IP 16189514 30476227 N/A two hybrid TheBiogrid
RAB3IP RAB3IP 11331580 16189514 30476227 N/A two hybrid TheBiogrid
STK38 RAB3IP 23435566 27898060 N/A N/A OmniPath

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