GENE：RBM47
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | RBM47 |
| FullNmae | RNA binding motif protein 47 |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:30358 |
| EnsembleID | ENSG00000163694 |
| Uniprot | A0AV96 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| RBM47 | immunogenic | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| RBM47 | GO:0000381,GO:0002244,GO:0003723,GO:0003723,GO:0003729,GO:0003730,GO:0005515,GO:0005634,GO:0005634,GO:0005634,GO:0005737,GO:0006397,GO:0008380,GO:0016554,GO:0019899,GO:0030895,GO:0032733,GO:0060340,GO:0070935,GO:0140767 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| AR | RBM47 | 20610535 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| ETS1 | RBM47 | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| GATA1 | RBM47 | 19941826 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| GATA2 | RBM47 | 19941826 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| YBX1 | RBM47 | 19151767 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| FOXP3 | RBM47 | 20554955 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| SMARCA4 | RBM47 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CEBPA | RBM47 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CTCF | RBM47 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| E2F1 | RBM47 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EGR1 | RBM47 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXA1 | RBM47 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOS | RBM47 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| HNF4A | RBM47 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| SPI1 | RBM47 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TRIM28 | RBM47 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TP53 | RBM47 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS0000237AF9 | RBM47 | 18185580 25416803 | mrna cleavage,inhibition | array technology | TarBase |
| URS0000116F83 | RBM47 | 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00005CC20C | RBM47 | 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000007A060 | RBM47 | 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000A939F | RBM47 | 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000046CDA6 | RBM47 | 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00003380CC | RBM47 | 22012620 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000040FA88 | RBM47 | 19536157 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000277201 | RBM47 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000013E79D | RBM47 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00005E6F45 | RBM47 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00002FF522 | RBM47 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00003003B4 | RBM47 | 19536157 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000070B1D | RBM47 | 19536157 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| ATM | RBM47 | 24234451 25348397 26496610 | association | anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| RNF2 | RBM47 | 25348397 | N/A | physical interaction | ComPPI |
| TRIM25 | RBM47 | 25348397 | N/A | physical interaction | ComPPI |
| ELAVL1 | RBM47 | 25348397 | N/A | physical interaction | ComPPI |
| ESR2 | RBM47 | 21182203 24234451 25348397 | association | affinity chromatography technology | ComPPI,IntAct |
| C1ORF94 | RBM47 | 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| PRR13 | RBM47 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| CAMK2A | RBM47 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| RBM47 | HSFY1 | 25348397 | N/A | physical interaction | ComPPI |
| RBM47 | CELF5 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| RBM47 | C10ORF55 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |