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GENE：SND1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SND1
FullNmae staphylococcal nuclease and tudor domain containing 1
LocusType gene with protein product
Status Approved
HGNC_id HGNC:30646
EnsembleID ENSG00000197157
Uniprot Q7KZF4

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SND1 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SND1 GO:0001649,GO:0003712,GO:0003723,GO:0003723,GO:0003723,GO:0004518,GO:0004519,GO:0004521,GO:0005515,GO:0005634,GO:0005829,GO:0005829,GO:0005829,GO:0006355,GO:0006402,GO:0010564,GO:0010587,GO:0016020,GO:0016442,GO:0016894,GO:0031047,GO:0042470,GO:0045296,GO:0070062,GO:0097433,GO:1905172

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
SND1 hsa:27044 path:hsa05203 Viral carcinogenesis - Homo sapiens (human)

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR SND1 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
E2F4 SND1 17531812 18971253 trascriptional regulation,stimulation chromatin immunoprecipitation array,inferred by curator TFlink
ETS1 SND1 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA1 SND1 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 SND1 18971253 19941826 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
HIF1A SND1 18971253 19828020 trascriptional regulation,stimulation chromatin immunoprecipitation array,inferred by curator TFlink
FOXP3 SND1 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXP1 SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
PRDM14 SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
SPI1 SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TRIM28 SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TAL1 SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ZNF263 SND1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
NFKB2 SND1 20363924 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS000003ABC4 SND1 19088304 25416803 mrna cleavage,inhibition array technology TarBase
URS0000070B1D SND1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00000DDD35 SND1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00000CF1D2 SND1 25416803 25965817 mrna cleavage,inhibition experimental interaction detection,western blot,quantitative reverse transcription pcr,immunohistochemistry,miRNA interference luciferase reporter assay TarBase
URS00005DEC41 SND1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00000BF7F9 SND1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00001067D1 SND1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00002CEB74 SND1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000075E2C3 SND1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000482389 SND1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001CE046 SND1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000032015F SND1 25216670 25416803 mrna cleavage,inhibition experimental interaction detection,western blot,quantitative reverse transcription pcr,immunohistochemistry,miRNA interference luciferase reporter assay TarBase

Source Target Pmid Interactiontype Methods Database
MAPK8 SND1 22135298 phosphorylation N/A PhosphoSite
MYB SND1 25361965 interaction type N/A PTMCode2
SND1 MYB 25361965 interaction type N/A PTMCode2
RBPJ SND1 25361965 interaction type N/A PTMCode2
SND1 RBPJ 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
SF3A3 SND1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SNRPB2 SND1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
UBE2I SND1 25348397 N/A physical interaction ComPPI
SNW1 SND1 20467437 24234451 25348397 association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
RPN1 SND1 25348397 N/A physical interaction ComPPI
NPM1 SND1 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
TOMM22 SND1 25348397 N/A physical interaction ComPPI
RPS26 SND1 25348397 N/A physical interaction ComPPI
MCM2 SND1 25348397 N/A physical interaction ComPPI
RPL10 SND1 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
PIM1 SND1 25348397 N/A two hybrid,physical interaction,in vitro,in vivo ComPPI
SND1 GTF2E1 25348397 N/A physical interaction,in vitro,in vivo ComPPI
SND1 GTF2E2 25348397 N/A physical interaction,in vitro,in vivo ComPPI
SND1 MYBL2 11259168 25348397 27898060 N/A in vitro ComPPI,OmniPath
SND1 STAT6 25348397 N/A physical interaction,in vitro,in vivo ComPPI
SND1 POLR2A 25348397 N/A physical interaction,in vitro,in vivo ComPPI
SND1 CREBBP 25348397 N/A physical interaction,in vitro,in vivo ComPPI
SND1 RBPJ 25348397 N/A physical interaction,in vitro,in vivo ComPPI
SND1 IKBKE 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
SND1 MYB 25348397 N/A physical interaction ComPPI
SND1 USP22 19615732 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SND1 PDPK1 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SND1 PRKAA1 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SND1 UBA5 20562859 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SND1 DHX9 25348397 N/A physical interaction ComPPI
SND1 RBM39 25348397 N/A physical interaction ComPPI
SND1 SIRT7 25348397 N/A physical interaction ComPPI
SND1 CUL3 25348397 N/A physical interaction ComPPI
SND1 CDK2 25348397 N/A physical interaction ComPPI
SND1 CAND1 25348397 N/A physical interaction ComPPI
SND1 APP 25348397 N/A physical interaction ComPPI
SND1 RPS3 25348397 N/A physical interaction ComPPI
SND1 HNRNPM 25348397 N/A physical interaction ComPPI
SND1 RPL19 25348397 N/A physical interaction ComPPI
SND1 MYBBP1A 25348397 N/A physical interaction ComPPI
SND1 SMNDC1 25348397 N/A physical interaction ComPPI
SND1 RPS20 25348397 N/A physical interaction ComPPI
SND1 NENF 25348397 N/A physical interaction ComPPI
SND1 RPL4 25348397 N/A physical interaction ComPPI
SND1 VDAC2 25348397 N/A physical interaction ComPPI
SND1 SRSF3 25348397 N/A physical interaction ComPPI
SND1 HNRNPU 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SND1 HNRNPR 25348397 N/A physical interaction ComPPI
SND1 SSR3 25348397 N/A physical interaction ComPPI
SND1 FN1 19738201 24234451 25348397 association cross-linking study,physical interaction ComPPI,IntAct
SND1 VCAM1 22623428 24234451 25348397 association cross-linking study,physical interaction ComPPI,IntAct
SND1 CSNK2A1 22113938 24234451 25348397 phosphorylation reaction physical interaction,protein kinase assay ComPPI,IntAct
SND1 ITGA4 25348397 N/A physical interaction ComPPI
SND1 G3BP1 20643132 24234451 25348397 colocalization,physical association anti bait coimmunoprecipitation,physical interaction,fluorescence microscopy ComPPI,IntAct
SND1 PRPF8 17632523 24234451 25348397 physical association pull down,physical interaction ComPPI,IntAct
SND1 MAK 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
SND1 TARDBP 25348397 N/A physical interaction ComPPI
SND1 EIF3CL 25348397 N/A physical interaction ComPPI
SND1 RPS11 25348397 N/A physical interaction ComPPI
SND1 RPS2 25348397 N/A physical interaction ComPPI
SND1 RPS6 25348397 N/A physical interaction ComPPI
SND1 RPS9 25348397 N/A physical interaction ComPPI
SND1 DDX3X 25348397 N/A physical interaction ComPPI
SND1 RPL23A 25348397 N/A physical interaction ComPPI
SND1 RPL35 25348397 N/A physical interaction ComPPI
SND1 RPS16 25348397 N/A physical interaction ComPPI
SND1 RPS27 25348397 N/A physical interaction ComPPI
SND1 RPS3A 25348397 N/A physical interaction ComPPI
SND1 SEM1 25348397 N/A physical interaction ComPPI
SND1 LIN28A 25348397 N/A physical interaction ComPPI
SND1 HUWE1 25348397 N/A physical interaction ComPPI
SND1 RAPGEF2 25348397 N/A physical interaction ComPPI
SND1 MDM2 25348397 N/A physical interaction ComPPI
SND1 CUL7 25348397 N/A physical interaction ComPPI
SND1 OBSL1 25348397 N/A physical interaction ComPPI
SND1 CCDC8 25348397 N/A physical interaction ComPPI
SND1 ESR1 25348397 N/A physical interaction ComPPI
SND1 MMP28 25348397 N/A physical interaction ComPPI
SND1 TDRD3 25348397 N/A physical interaction ComPPI
SND1 TXNDC5 25348397 N/A physical interaction ComPPI
SND1 NTRK1 25348397 N/A physical interaction ComPPI
SND1 CNOT1 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SND1 U2AF2 25348397 N/A physical interaction ComPPI
SND1 CDH1 25348397 N/A physical interaction ComPPI
SND1 PTP4A1 25348397 N/A physical interaction ComPPI
SND1 MTDH 24234451 24981741 25348397 association,physical association anti bait coimmunoprecipitation,anti tag coimmunoprecipitation,pull down,physical interaction ComPPI,IntAct
SND1 PA2G4 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 TRAP1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 ANXA5 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 GPI 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 IDH2 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 PDIA3 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 UBE2N 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 MRPL12 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 SLC25A10 25348397 N/A physical interaction ComPPI
SND1 CRNN 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 ZNF207 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 CPNE3 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 CS 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 PYGL 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 DNAJC8 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 PLS3 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 CPSF6 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 NANS 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 SF3A1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 ECHS1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 SRP68 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 MYL12B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 AIMP1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SND1 CYLD 25348397 N/A physical interaction ComPPI
SND1 DLD 24234451 25348397 29128334 association cross-linking study,physical interaction ComPPI,IntAct
SND1 DLST 24234451 25348397 29128334 association cross-linking study,physical interaction ComPPI,IntAct
SND1 PDHA1 24234451 25348397 29128334 association cross-linking study,physical interaction ComPPI,IntAct
SND1 SOD1 24234451 25348397 29128334 association cross-linking study,physical interaction ComPPI,IntAct
SND1 TRIM25 25348397 N/A physical interaction ComPPI
SND1 BRCA1 25348397 N/A physical interaction ComPPI
SND1 YAP1 25348397 N/A physical interaction ComPPI
SND1 PIWIL1 20937909 24234451 25348397 N/A fluorescence polarization spectroscopy,isothermal titration calorimetry,x-ray crystallography,physical interaction ComPPI,IntAct
SND1 HLA-B 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
SND1 ESR2 21182203 24234451 25348397 association affinity chromatography technology ComPPI,IntAct
SND1 TIA1 20643132 24234451 25348397 colocalization fluorescence microscopy ComPPI,IntAct
SND1 JUN 24234451 25348397 25609649 association anti bait coimmunoprecipitation ComPPI,IntAct
SND1 BCAR1 24234451 25348397 28007913 association anti bait coimmunoprecipitation ComPPI,IntAct
SND1 CANX 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
EIF5B SND1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SEM1 SND1 25348397 N/A physical interaction ComPPI
ILF2 SND1 25348397 N/A physical interaction ComPPI
LZTR1 SND1 25348397 N/A physical interaction ComPPI
NUDCD1 SND1 24234451 29021621 association anti tag coimmunoprecipitation IntAct
PTGER4 SND1 24234451 28298427 physical association ubiquitin reconstruction IntAct
HNRNPC SND1 24234451 30021884 physical association cross-linking study IntAct
CASP3 SND1 19820703 27898060 N/A N/A OmniPath

Visualization










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