Gene Information gene info

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GENE：VTA1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol VTA1
FullNmae vesicle trafficking 1
LocusType gene with protein product
Status Approved
HGNC_id HGNC:20954
EnsembleID ENSG00000009844
Uniprot Q9NP79

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
VTA1 mitotic_cd 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
VTA1 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
VTA1 GO:0005515,GO:0005654,GO:0005771,GO:0005829,GO:0005829,GO:0010008,GO:0015031,GO:0016236,GO:0032511,GO:0036258,GO:0043231,GO:0070062,GO:0071985,GO:1904903

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
VTA1 hsa:51534 path:hsa04144 Endocytosis - Homo sapiens (human)

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR VTA1 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 VTA1 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 VTA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA VTA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF VTA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 VTA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 VTA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXP1 VTA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
GATA2 VTA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A VTA1 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00004CCA62 VTA1 23824327 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000153377 VTA1 23824327 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000366551 VTA1 23824327 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS000075BDA4 VTA1 23824327 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS00000F7766 VTA1 23824327 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000029EBD VTA1 23824327 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000070B1D VTA1 23824327 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000183BED VTA1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001CC864 VTA1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00003AD2AA VTA1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000011DF VTA1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000038446A VTA1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000018D2BE VTA1 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00005E1A16 VTA1 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS0000140295 VTA1 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00002A71AD VTA1 19536157 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
CHMP2A VTA1 25348397 N/A physical interaction ComPPI
VPS4B VTA1 25348397 N/A physical interaction ComPPI
NECAB2 VTA1 14525934 16189514 25348397 N/A two hybrid,physical interaction,two hybrid ComPPI,HPRD
ZNRD2 VTA1 14525934 16189514 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
TRAF6 VTA1 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
KCTD13 VTA1 14525934 16189514 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
RABAC1 VTA1 14525934 16189514 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
NF2 VTA1 25348397 N/A physical interaction ComPPI
MAPK3 VTA1 25348397 N/A physical interaction ComPPI
NBR1 VTA1 16189514 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach ComPPI,IntAct
GSK3B VTA1 20368287 24234451 25348397 physical association pull down,physical interaction ComPPI,IntAct
DLD VTA1 25348397 N/A physical interaction ComPPI
NTRK1 VTA1 25348397 N/A physical interaction ComPPI
GSK3A VTA1 20368287 24234451 25348397 physical association pull down,physical interaction ComPPI,IntAct
ZBTB16 VTA1 14525934 16189514 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid prey pooling approach,two hybrid ComPPI,HPRD,IntAct
CTTN VTA1 25348397 N/A physical interaction ComPPI
BEX3 VTA1 14525934 16777077 21988832 24234451 25348397 27898060 physical association two hybrid,experimental interaction detection,physical interaction,in vitro,in vivo,two hybrid ComPPI,HPRD,IntAct,OmniPath
VCAM1 VTA1 22623428 24234451 25348397 association cross-linking study,physical interaction ComPPI,IntAct
MBIP VTA1 14525934 16189514 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
ELAVL1 VTA1 25348397 N/A physical interaction ComPPI
CDK4 VTA1 14525934 16189514 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
CCNC VTA1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
KLHL12 VTA1 14525934 16189514 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
MAGEA11 VTA1 14525934 16189514 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
VTA1 CHMP5 16730941 17261583 21543490 24234451 25348397 27898060 physical association two hybrid,physical interaction ComPPI,IntAct,OmniPath
VTA1 APP 25348397 N/A physical interaction ComPPI
VTA1 UBXN1 25348397 N/A physical interaction ComPPI
VTA1 KSR1 24234451 25348397 27086506 association anti tag coimmunoprecipitation ComPPI,IntAct
VTA1 PLEKHA7 24234451 25348397 28877994 association anti bait coimmunoprecipitation ComPPI,IntAct
CBS VTA1 14525934 16189514 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct

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