GENE：CFDP1
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | CFDP1 |
| FullNmae | craniofacial development protein 1 |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:1873 |
| EnsembleID | ENSG00000153774 |
| Uniprot | Q9UEE9 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| CFDP1 | immunogenic | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| CFDP1 | GO:0000776,GO:0000812,GO:0003674,GO:0005575,GO:0005634,GO:0006338,GO:0007155,GO:0008150,GO:0008360,GO:0042127,GO:0044346,GO:2000270 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| AR | CFDP1 | 20610535 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| ETS1 | CFDP1 | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| YBX1 | CFDP1 | 19151767 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| SMARCA4 | CFDP1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CEBPA | CFDP1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CTCF | CFDP1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| E2F4 | CFDP1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EGR1 | CFDP1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXA1 | CFDP1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOS | CFDP1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| GATA2 | CFDP1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| HNF4A | CFDP1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| MITF | CFDP1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| RUNX1 | CFDP1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| SPI1 | CFDP1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TAL1 | CFDP1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TP53 | CFDP1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| MYC | CFDP1 | N/A | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS0000330617 | CFDP1 | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001B341F | CFDP1 | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000005CF5F | CFDP1 | 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001DE669 | CFDP1 | 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00002152A8 | CFDP1 | 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000065D58 | CFDP1 | 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| LMNA | CFDP1 | 24234451 25348397 29568061 | association | proximity-dependent biotin identification | ComPPI,IntAct |
| SMAD3 | CFDP1 | 14525934 15231748 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid | ComPPI,HPRD,IntAct |
| RUVBL1 | CFDP1 | 25348397 | N/A | physical interaction | ComPPI |
| CSNK2A1 | CFDP1 | 10350657 14525934 25348397 | N/A | experimental interaction detection,in vitro | ComPPI,HPRD |
| EWSR1 | CFDP1 | 14525934 16189514 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid | ComPPI,HPRD,IntAct |
| H3C1 | CFDP1 | 24234451 25348397 29568061 | association | proximity-dependent biotin identification | ComPPI,IntAct |
| SRCAP | CFDP1 | 25348397 | N/A | physical interaction | ComPPI |
| ID2 | CFDP1 | 25348397 | N/A | physical interaction | ComPPI |
| DMAP1 | CFDP1 | 25348397 | N/A | physical interaction | ComPPI |
| CFDP1 | APP | 25348397 | N/A | physical interaction | ComPPI |
| CFDP1 | H2BC1 | 25348397 | N/A | physical interaction | ComPPI |
| CFDP1 | RUVBL2 | 25348397 | N/A | physical interaction | ComPPI |
| CFDP1 | RBPJ | 24234451 25348397 25609649 | association | physical interaction,tandem affinity purification | ComPPI,IntAct |
| H2BC9 | CFDP1 | 24234451 30021884 | physical association | cross-linking study | IntAct |