Gene Information gene info

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GENE：COL7A1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol COL7A1
FullNmae collagen type VII alpha 1 chain
LocusType gene with protein product
Status Approved
HGNC_id HGNC:2214
EnsembleID ENSG00000114270
Uniprot Q02388

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
COL7A1 mitotic_cd 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
COL7A1 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
COL7A1 GO:0004867,GO:0005515,GO:0005576,GO:0005590,GO:0005604,GO:0005615,GO:0005615,GO:0005788,GO:0007155,GO:0008544,GO:0030020,GO:0030020,GO:0030020,GO:0030020,GO:0030134,GO:0030198,GO:0033116,GO:0035987,GO:0062023,GO:0062023,GO:0062023

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
COL7A1 hsa:1294 path:hsa04974 Protein digestion and absorption - Homo sapiens (human)

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
SP1 COL7A1 10980546 9092567 trascriptional regulation,stimulation inferred by curator,electrophoretic mobility shift assay TFlink
E2F1 COL7A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 COL7A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS COL7A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A COL7A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
NFKB1 COL7A1 10086338 trascriptional regulation,stimulation inferred by curator TFlink
RELA COL7A1 10086338 trascriptional regulation,stimulation inferred by curator TFlink
SMAD3 COL7A1 9843964 trascriptional regulation,stimulation inferred by curator TFlink
SMAD4 COL7A1 9843964 trascriptional regulation,stimulation inferred by curator TFlink
DAND5 COL7A1 10980546 9092567 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000272A3D COL7A1 21436257 rna interference,inhibition miRNA interference luciferase reporter assay miRSponge
URS0000272A3D COL7A1 21436257 25416803 mrna cleavage,inhibition miRNA interference luciferase reporter assay TarBase

Source Target Pmid Interactiontype Methods Database
COL7A1 MIA3 25361965 interaction type N/A PTMCode2
MIA3 COL7A1 25361965 interaction type N/A PTMCode2
MMP2 COL7A1 25361965 interaction type N/A PTMCode2
COL7A1 MMP2 25361965 interaction type N/A PTMCode2
LAMA5 COL7A1 25361965 interaction type N/A PTMCode2
COL7A1 LAMA5 25361965 interaction type N/A PTMCode2
COL1A1 COL7A1 25361965 interaction type N/A PTMCode2
COL7A1 COL1A1 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
HSPA8 COL7A1 14525934 16169070 24234451 25348397 physical association two hybrid,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
THBS1 COL7A1 14525934 25348397 9840442 N/A two hybrid,physical interaction,two hybrid ComPPI,HPRD
NFKBIA COL7A1 25348397 N/A physical interaction ComPPI
COL4A1 COL7A1 25348397 N/A physical interaction,in vitro ComPPI
SHKBP1 COL7A1 14525934 16169070 24234451 25348397 physical association two hybrid,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
LAMA1 COL7A1 14525934 25348397 9169408 N/A experimental interaction detection,in vitro ComPPI,HPRD
SNCA COL7A1 25348397 N/A physical interaction ComPPI
LAMA5 COL7A1 14525934 25348397 27898060 9245798 N/A experimental interaction detection,physical interaction,in vitro,in vivo ComPPI,HPRD,OmniPath
BMP1 COL7A1 11986329 14525934 25348397 27898060 N/A experimental interaction detection,in vivo ComPPI,HPRD,OmniPath
COL7A1 COL1A1 14525934 25348397 9169408 N/A experimental interaction detection,physical interaction,in vitro ComPPI,HPRD
COL7A1 MMP2 10652000 14525934 25348397 27898060 N/A experimental interaction detection,in vivo ComPPI,HPRD,OmniPath
COL7A1 LAMC2 14525934 25348397 9989793 N/A experimental interaction detection,physical interaction,in vitro,in vivo ComPPI,HPRD
COL7A1 LAMB3 14525934 25348397 9989793 N/A experimental interaction detection,physical interaction,in vitro,in vivo ComPPI,HPRD
COL7A1 FBXL2 16169070 24234451 25348397 physical association two hybrid,two hybrid pooling approach,two hybrid fragment pooling approach ComPPI,IntAct
COL7A1 ZC3H7A 14525934 16169070 24234451 25348397 physical association two hybrid,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
COL7A1 FN1 14525934 25348397 27898060 7963647 9169408 N/A experimental interaction detection,physical interaction ComPPI,HPRD,OmniPath
COL7A1 LRRC57 25348397 N/A physical interaction ComPPI
COL7A1 MOV10 25348397 N/A physical interaction ComPPI
COL7A1 NXF1 25348397 N/A physical interaction ComPPI
COL7A1 MIA3 19269366 24234451 25348397 27898060 physical association anti bait coimmunoprecipitation,pull down ComPPI,IntAct,OmniPath
COL7A1 CBFB 20195357 24234451 25348397 physical association display technology ComPPI,IntAct

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