Gene Information gene info

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GENE：LIN7C

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol LIN7C
FullNmae lin-7 homolog C, crumbs cell polarity complex component
LocusType gene with protein product
Status Approved
HGNC_id HGNC:17789
EnsembleID ENSG00000148943
Uniprot Q9NUP9

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
LIN7C immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
LIN7C GO:0002011,GO:0005515,GO:0005737,GO:0005886,GO:0005886,GO:0005911,GO:0005911,GO:0005923,GO:0006887,GO:0007269,GO:0008092,GO:0015031,GO:0016323,GO:0019904,GO:0045199,GO:0045202,GO:0097016,GO:0097016,GO:0097025,GO:0097025,GO:0098793,GO:0098839,GO:0098978,GO:1903361

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
LIN7C PATJ 10102271 10871881 11927608 16129888 17012742 17486063 18005931 18177979 2288140 22881460 2344615 26192618 9753323 9753324 9822620 interaction type N/A ACSN

Source Target Pmid Interactiontype Methods Database
AR LIN7C 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
YBX1 LIN7C 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 LIN7C 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA LIN7C 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF LIN7C 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000338542 LIN7C 20584899 rna interference,inhibition experimental interaction detection miRSponge
URS00004505E4 LIN7C 20371350 25416803 mrna cleavage,inhibition nucleotide sequence identification TarBase
URS0000338542 LIN7C 18668040 20584899 22473208 25416803 mrna cleavage,inhibition experimental interaction detection,clip TarBase
URS00002FC5B0 LIN7C 20371350 25416803 mrna cleavage,inhibition nucleotide sequence identification TarBase
URS0000096022 LIN7C 20371350 25416803 mrna cleavage,inhibition nucleotide sequence identification TarBase
URS000009262D LIN7C 18591254 25416803 mrna cleavage,inhibition array technology TarBase
URS00005ACA7C LIN7C 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000027080C LIN7C 20371350 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000019F055 LIN7C 20371350 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000285DCB LIN7C 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS0000007340 LIN7C 24374217 25416803 mrna cleavage,inhibition clip TarBase
URS0000610EFA LIN7C 20371350 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000008F0CF LIN7C 20371350 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000038718E LIN7C 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000160683 LIN7C 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00000EED18 LIN7C 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000008C563 LIN7C 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000355E82 LIN7C 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00002B7450 LIN7C 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS0000078918 LIN7C 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00005651EE LIN7C 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00002D349B LIN7C 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00003FBC84 LIN7C 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000005CF5F LIN7C 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS00001DE669 LIN7C 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS00002152A8 LIN7C 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS0000065D58 LIN7C 22473208 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
SPATA2 LIN7C 19615732 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
YES1 LIN7C 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PALS1 LIN7C 24234451 24366813 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
AMOT LIN7C 19615732 24234451 24366813 25348397 association,physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
NF2 LIN7C 25348397 N/A physical interaction ComPPI
MPDZ LIN7C 25348397 N/A physical interaction ComPPI
COPS5 LIN7C 18850735 24234451 25348397 association tandem affinity purification ComPPI,IntAct
APC LIN7C 25348397 N/A physical interaction ComPPI
CFTR LIN7C 17110338 24234451 25348397 association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
KCNJ4 LIN7C 25348397 N/A physical interaction ComPPI
WWC1 LIN7C 25348397 N/A physical interaction ComPPI
RAD18 LIN7C 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
CASK LIN7C 25348397 N/A physical interaction ComPPI
XPO1 LIN7C 25348397 N/A physical interaction ComPPI
DLG1 LIN7C 25348397 N/A physical interaction ComPPI
TUBA1A LIN7C 24234451 25348397 27291054 association pull down ComPPI,IntAct
APBA1 LIN7C 25348397 N/A physical interaction ComPPI
YAP1 LIN7C 24234451 24255178 24366813 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
KCNJ12 LIN7C 14525934 14960569 15024025 25348397 N/A experimental interaction detection,physical interaction,in vitro,in vivo ComPPI,HPRD
LIN7B LIN7C 25348397 N/A physical interaction ComPPI
HTR2C LIN7C 12006486 14525934 24234451 25348397 28298427 physical association experimental interaction detection,ubiquitin reconstruction,physical interaction,in vivo ComPPI,HPRD,IntAct
LIN7C BAIAP2 14525934 14596909 25348397 N/A two hybrid,experimental interaction detection,in vitro,in vivo,two hybrid ComPPI,HPRD
LIN7C ABCA1 14525934 16192275 25348397 27898060 N/A experimental interaction detection,in vitro ComPPI,HPRD,OmniPath
LIN7C KCNJ18 25348397 N/A physical interaction ComPPI
LIN7C UIMC1 19615732 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LIN7C ELAVL1 25348397 N/A physical interaction ComPPI
LIN7C AMOTL2 24234451 24255178 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LIN7C LATS2 25348397 N/A physical interaction ComPPI
LIN7C FOXRED2 25348397 N/A physical interaction ComPPI
LIN7C SLC25A41 25348397 N/A physical interaction ComPPI
LIN7C PATJ 25348397 N/A physical interaction ComPPI
LIN7C MPP2 25348397 N/A physical interaction ComPPI
LIN7C PALS2 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
LIN7C ABLIM1 25348397 N/A physical interaction ComPPI
LIN7C MPP7 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
LIN7C MPP3 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
LIN7C KIF26B 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LIN7C ABLIM2 25348397 N/A physical interaction ComPPI
LIN7C ARHGEF26 25348397 N/A physical interaction ComPPI
LIN7C PXDC1 25348397 N/A physical interaction ComPPI
LIN7C TMEM17 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LIN7C CAPZA2 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LIN7C NSUN2 25348397 N/A physical interaction ComPPI
LIN7C SLC20A1 25348397 N/A physical interaction ComPPI
LIN7C ZMYM1 24234451 25348397 25852190 association anti tag coimmunoprecipitation ComPPI,IntAct
LIN7C EZR 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
LIN7C LAMP1 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
LIN7C TGOLN2 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
LIN7C DNAJC5 24234451 29997244 physical association bioluminescence resonance energy transfer IntAct
LIN7C SLC6A12 10228153 27898060 N/A N/A OmniPath

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