Gene Information gene info

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GENE：RBM38

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol RBM38
FullNmae RNA binding motif protein 38
LocusType gene with protein product
Status Approved
HGNC_id HGNC:15818
EnsembleID ENSG00000132819
Uniprot Q9H0Z9

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
RBM38 parthanatos 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
RBM38 mitotic_cd 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
RBM38 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
RBM38 autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
RBM38 GO:0003723,GO:0003730,GO:0005515,GO:0005634,GO:0005829,GO:0006397,GO:0007049,GO:0008380,GO:0010830,GO:0030154,GO:0043484,GO:0043484

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 RBM38 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA1 RBM38 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 RBM38 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 RBM38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA RBM38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF RBM38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 RBM38 18971253 22798430 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 RBM38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 RBM38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 RBM38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS RBM38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A RBM38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF RBM38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 RBM38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
SPI1 RBM38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ZNF263 RBM38 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00003CF1AD RBM38 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000035CC3E RBM38 21572407 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000A057E RBM38 21572407 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000006372A RBM38 21572407 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000BF7F9 RBM38 21572407 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00005DEC41 RBM38 21572407 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00003003B4 RBM38 21572407 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00003BBF48 RBM38 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS000000C73C RBM38 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS0000521626 RBM38 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS0000001EB3 RBM38 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS000055128B RBM38 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS000006FDD4 RBM38 21572407 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000122F23 RBM38 21572407 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000041FA2C RBM38 21572407 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00003380CC RBM38 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002367FA RBM38 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000022AAA RBM38 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00001B968D RBM38 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00006097A6 RBM38 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00005F1B8C RBM38 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00001496AE RBM38 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00005CC20C RBM38 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000EE7F0 RBM38 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00001CF056 RBM38 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000075AB14 RBM38 25416803 26701625 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
GSK3B RBM38 22135298 phosphorylation N/A PhosphoSite

Source Target Pmid Interactiontype Methods Database
ZC3H10 RBM38 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
MDM2 RBM38 22710720 25348397 27898060 N/A physical interaction ComPPI,OmniPath
RCHY1 RBM38 21988832 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
HNRNPH1 RBM38 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RBFOX2 RBM38 25348397 N/A physical interaction ComPPI
CLASRP RBM38 25348397 N/A physical interaction ComPPI
PTCD3 RBM38 25348397 N/A physical interaction ComPPI
RBM24 RBM38 25348397 N/A physical interaction ComPPI
TMEM184A RBM38 25348397 N/A physical interaction ComPPI
GSK3B RBM38 24142875 25622105 25823026 27898060 inhibition N/A OmniPath

Visualization










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