GeneInfo:
GeneAttribute
GeneDescription
GeneSymbol
CD84
FullNmae
CD84 molecule
LocusType
gene with protein product
Status
Approved
HGNC_id
HGNC:1704
EnsembleID
ENSG00000066294
Uniprot
Q9UIB8
Protein Structure:
Gene Description in Publicaton:
GeneSymbol
CellDeathType
PMID
Description
GeneType
CD84
pyroptosis
38538696
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore)
retulator signature
CD84
lysosomal_cd
36341760
220 lysosome-dependent cell death genes.
retulator signature
CD84
lysosomal_cd
36341760
The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns.
regulator signature
CD84
immunogenic
38538696
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore)
retulator signature
Go Annotation:
GeneSymbol
Go id
CD84
GO:0002250,GO:0005515,GO:0005886,GO:0005886,GO:0006914,GO:0006952,GO:0007156,GO:0009897,GO:0032685,GO:0032701,GO:0032715,GO:0032760,GO:0033004,GO:0042110,GO:0042802,GO:0043030,GO:0043231,GO:0043305,GO:0045087,GO:0071639,GO:2001256
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source
Target
Pmid
Interactiontype
Methods
Database
SH2D1A
CD84
12163025
19150402
23180781
physical association
two hybrid,peptide array
InnateDB
Source
Target
Pmid
Interactiontype
Methods
Database
ETS1
CD84
18971253
20019798
trascriptional regulation,stimulation
inferred by curator,chromatin immunoprecipitation assay
TFlink
FOXP3
CD84
20554955
trascriptional regulation,stimulation
chromatin immunoprecipitation array
TFlink
SMARCA4
CD84
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
CEBPA
CD84
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
CTCF
CD84
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
FOS
CD84
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
GATA2
CD84
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
HNF4A
CD84
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
RUNX1
CD84
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
SPI1
CD84
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
TAL1
CD84
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
Source
Target
Pmid
Interactiontype
Methods
Database
URS0000486E0B
CD84
23446348
25416803
mrna cleavage,inhibition
clip
TarBase
URS000047A67D
CD84
23446348
25416803
mrna cleavage,inhibition
clip
TarBase
URS000046CDA6
CD84
23446348
25416803
mrna cleavage,inhibition
clip
TarBase
URS000013ABA3
CD84
23446348
25416803
mrna cleavage,inhibition
clip
TarBase
URS000075D860
CD84
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00000EEE35
CD84
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS0000366551
CD84
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00001067D1
CD84
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS000040FA88
CD84
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00003AA845
CD84
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS0000007FBA
CD84
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
URS00002C0FCB
CD84
23824327
25416803
mrna cleavage,inhibition
clip
TarBase
Source
Target
Pmid
Interactiontype
Methods
Database
CD84
SH2D1A
25361965
interaction type
N/A
PTMCode2
SH2D1A
CD84
25361965
interaction type
N/A
PTMCode2
Source
Target
Pmid
Interactiontype
Methods
Database
PTPN11
CD84
25348397
N/A
physical interaction
ComPPI
CUL3
CD84
25348397
N/A
physical interaction
ComPPI
SH2D1A
CD84
11477068
12225753
12928397
14525934
24234451
25348397
association
two hybrid,coimmunoprecipitation,experimental interaction detection,nuclear magnetic resonance,physical interaction,in vitro,in vivo,two hybrid
ComPPI,HPRD,IntAct
CD84
SH2D1B
11689425
12115647
12928397
14525934
23322602
24234451
25348397
association
coimmunoprecipitation,experimental interaction detection,pull down,physical interaction,in vitro
ComPPI,HPRD,IntAct
CD84
ABL2
23322602
24234451
25348397
association
pull down
ComPPI,IntAct
CD84
CD84
11238035
11389028
11414741
11564780
12621057
14525934
17563375
24234451
N/A
cosedimentation in solution,experimental interaction detection,molecular sieving,x-ray crystallography,two hybrid
HPRD,IntAct
Visualization