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GENE：CHPF

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol CHPF
FullNmae chondroitin polymerizing factor
LocusType gene with protein product
Status Approved
HGNC_id HGNC:24291
EnsembleID ENSG00000123989
Uniprot Q8IZ52

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
CHPF immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
CHPF GO:0000139,GO:0005759,GO:0005829,GO:0030206,GO:0030206,GO:0030206,GO:0032580,GO:0046872,GO:0047238,GO:0047238,GO:0047238,GO:0050510,GO:0050510

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
CHPF hsa:79586 path:hsa00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate - Homo sapiens (human)
CHPF hsa:79586 path:hsa01100 Metabolic pathways - Homo sapiens (human)

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ESR1 CHPF 18414489 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 CHPF 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF CHPF 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A CHPF 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00000ED600 CHPF 20215506 25416803 mrna cleavage,inhibition array technology TarBase
URS000003ABC4 CHPF 19088304 25416803 mrna cleavage,inhibition array technology TarBase
URS000041CB9C CHPF 23622248 25416803 mrna cleavage,inhibition clash TarBase

Source Target Pmid Interactiontype Methods Database
PIN1 CHPF 14525934 16169070 24234451 25348397 physical association two hybrid,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
SKIL CHPF 14525934 15231748 24234451 25348397 physical association two hybrid,physical interaction,two hybrid ComPPI,HPRD,IntAct
BTRC CHPF 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
SMAD9 CHPF 15231748 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
CHPF EXOSC6 14525934 15231747 25348397 N/A two hybrid,physical interaction,two hybrid ComPPI,HPRD
CHPF EXOSC10 14525934 15231747 24234451 25348397 physical association two hybrid,physical interaction,two hybrid ComPPI,HPRD,IntAct
CHPF PRKN 22082830 25348397 27898060 N/A physical interaction ComPPI,OmniPath
CHPF NKX3-1 25348397 N/A physical interaction ComPPI
CHPF FBXO6 25348397 N/A physical interaction ComPPI
CHPF PTCH1 25348397 N/A physical interaction ComPPI
CHPF TRIP11 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
CHPF MED4 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
CHPF TRIM25 25348397 N/A physical interaction ComPPI
TRADD CHPF 24234451 30561431 association virotrap IntAct

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