GeneInfo:
| GeneAttribute |
GeneDescription |
| GeneSymbol |
PDZRN3 |
| FullNmae |
PDZ domain containing ring finger 3 |
| LocusType |
gene with protein product |
| Status |
Approved |
| HGNC_id |
HGNC:17704 |
| EnsembleID |
ENSG00000121440 |
| Uniprot |
Q9UPQ7 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol |
CellDeathType |
PMID |
Description |
GeneType |
| PDZRN3 |
immunogenic |
38538696 |
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) |
retulator signature |
Go Annotation:
| GeneSymbol |
Go id |
| PDZRN3 |
GO:0004842,GO:0005737,GO:0007528,GO:0008270,GO:0016567,GO:0016567,GO:0016567,GO:0031594,GO:0061630 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
| AR |
PDZRN3 |
20610535
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation array |
TFlink |
| YBX1 |
PDZRN3 |
19151767
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
| PRDM14 |
PDZRN3 |
18971253
20953172
|
trascriptional regulation,stimulation |
inferred by curator,chromatin immunoprecipitation assay |
TFlink |
| CEBPA |
PDZRN3 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| CTCF |
PDZRN3 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| E2F1 |
PDZRN3 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| FOXA1 |
PDZRN3 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| GATA2 |
PDZRN3 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| HNF4A |
PDZRN3 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| MITF |
PDZRN3 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| RUNX1 |
PDZRN3 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| TRIM28 |
PDZRN3 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
| URS00000F4AC3 |
PDZRN3 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
| Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
| PDZRN3 |
MUSK |
25361965
|
interaction type |
N/A |
PTMCode2 |
| MUSK |
PDZRN3 |
25361965
|
interaction type |
N/A |
PTMCode2 |
| Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
| OIP5 |
PDZRN3 |
25348397
|
N/A |
physical interaction |
ComPPI |
| STX11 |
PDZRN3 |
25348397
|
N/A |
physical interaction |
ComPPI |
| EGLN3 |
PDZRN3 |
24234451
25348397
26972000
|
association |
anti tag coimmunoprecipitation |
ComPPI,IntAct |
| UBE2D2 |
PDZRN3 |
25348397
|
N/A |
physical interaction |
ComPPI |
| BMPR2 |
PDZRN3 |
14525934
15188402
25348397
|
N/A |
experimental interaction detection,in vitro |
ComPPI,HPRD |
| EFNB2 |
PDZRN3 |
14525934
15458844
25348397
|
N/A |
two hybrid,two hybrid |
ComPPI,HPRD |
| PDZRN3 |
MUSK |
25348397
|
N/A |
physical interaction |
ComPPI |
| PDZRN3 |
LNX1 |
25348397
|
N/A |
physical interaction |
ComPPI |
| PDZRN3 |
FAM13C |
25348397
|
N/A |
physical interaction |
ComPPI |
| PDZRN3 |
OFD1 |
24234451
25348397
26638075
|
association |
physical interaction,proximity-dependent biotin identification |
ComPPI,IntAct |
| PDZRN3 |
SDHA |
25348397
|
N/A |
physical interaction |
ComPPI |
| PDZRN3 |
ZNF785 |
25348397
|
N/A |
physical interaction |
ComPPI |
| PDZRN3 |
POTEB3 |
25348397
|
N/A |
physical interaction |
ComPPI |
| PDZRN3 |
FZD4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| LNX2 |
PDZRN3 |
25348397
|
N/A |
physical interaction |
ComPPI |
| PDZRN3 |
PDZRN3 |
10431247
14525934
|
N/A |
experimental interaction detection |
HPRD |
Visualization
