GeneInfo:
GeneAttribute |
GeneDescription |
GeneSymbol |
COMMD9 |
FullNmae |
COMM domain containing 9 |
LocusType |
gene with protein product |
Status |
Approved |
HGNC_id |
HGNC:25014 |
EnsembleID |
ENSG00000110442 |
Uniprot |
Q9P000 |
Protein Structure:
Gene Description in Publicaton:
GeneSymbol |
CellDeathType |
PMID |
Description |
GeneType |
COMMD9 |
immunogenic |
38538696 |
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) |
retulator signature |
Go Annotation:
GeneSymbol |
Go id |
COMMD9 |
GO:0005515,GO:0005576,GO:0005654,GO:0005794,GO:0005829,GO:0006814,GO:0034774,GO:0042632,GO:1904813 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
ETS1 |
COMMD9 |
18971253
20019798
|
trascriptional regulation,stimulation |
inferred by curator,chromatin immunoprecipitation assay |
TFlink |
YBX1 |
COMMD9 |
19151767
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
CEBPA |
COMMD9 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
FOS |
COMMD9 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
MITF |
COMMD9 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
SPI1 |
COMMD9 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
URS0000324096 |
COMMD9 |
N/A
|
rna interference,inhibition |
experimental interaction detection |
miRSponge |
URS0000324096 |
COMMD9 |
18668040
25416803
|
mrna cleavage,inhibition |
experimental interaction detection,experimental interaction detection,experimental interaction detection |
TarBase |
URS00000BE495 |
COMMD9 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
URS00001F373E |
COMMD9 |
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00001FC26E |
COMMD9 |
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000048D44E |
COMMD9 |
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000005CE28 |
COMMD9 |
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00000EEF5F |
COMMD9 |
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00000753AD |
COMMD9 |
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000008A99 |
COMMD9 |
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00005CC20C |
COMMD9 |
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000075C4B1 |
COMMD9 |
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
CCDC22 |
COMMD9 |
23563313
24234451
25348397
26496610
|
association,physical association |
anti bait coimmunoprecipitation,anti tag coimmunoprecipitation,pull down,physical interaction,tandem affinity purification |
ComPPI,IntAct |
COMMD1 |
COMMD9 |
25348397
|
N/A |
physical interaction |
ComPPI |
NFKB1 |
COMMD9 |
15799966
24234451
25348397
|
association |
pull down,physical interaction |
ComPPI,IntAct |
XPO7 |
COMMD9 |
25348397
|
N/A |
physical interaction |
ComPPI |
VPS29 |
COMMD9 |
25348397
|
N/A |
physical interaction |
ComPPI |
RELB |
COMMD9 |
15799966
24234451
25348397
|
association |
pull down,physical interaction |
ComPPI,IntAct |
COMMD6 |
COMMD9 |
23563313
24234451
25348397
|
association,physical association |
physical interaction,two hybrid array,tandem affinity purification,two hybrid prey pooling approach |
ComPPI,IntAct |
NXF1 |
COMMD9 |
25348397
|
N/A |
physical interaction |
ComPPI |
MOV10 |
COMMD9 |
25348397
|
N/A |
physical interaction |
ComPPI |
COMMD9 |
DCDC2 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
Visualization