Gene Information gene info

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GENE：SNCB

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SNCB
FullNmae synuclein beta
LocusType gene with protein product
Status Approved
HGNC_id HGNC:11140
EnsembleID ENSG00000074317
Uniprot Q16143

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SNCB immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SNCB GO:0004859,GO:0005509,GO:0005515,GO:0005737,GO:0005829,GO:0007268,GO:0016234,GO:0042417,GO:0043025,GO:0043524,GO:0043679,GO:0046914,GO:0048488,GO:0050808,GO:0051402,GO:1903136,GO:1903136

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
SNCB ELK1 11279280 23180781 physical association anti tag coimmunoprecipitation InnateDB

Source Target Pmid Interactiontype Methods Database
YBX1 SNCB 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
CTCF SNCB 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 SNCB 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ETS1 SNCB 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 SNCB 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF SNCB 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MYT1 SNCB 21386983 trascriptional regulation,stimulation inferred by curator TFlink
MTF1 SNCB 21386983 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000237AF9 SNCB 18185580 25416803 mrna cleavage,inhibition array technology TarBase
URS00001B9F58 SNCB 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000043D2C1 SNCB 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000008AA34 SNCB 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000118224 SNCB 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00002C02E4 SNCB 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000015188E SNCB 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00002CE0C6 SNCB 21572407 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
CHEK1 SNCB 22135298 phosphorylation N/A PhosphoSite
PLK2 SNCB 22135298 phosphorylation N/A PhosphoSite
PLK1 SNCB 22135298 phosphorylation N/A PhosphoSite
PLK3 SNCB 22135298 phosphorylation N/A PhosphoSite
SNCAIP SNCB 25361965 interaction type N/A PTMCode2
SNCB SNCAIP 25361965 interaction type N/A PTMCode2
APP SNCB 25361965 interaction type N/A PTMCode2
SNCB APP 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
HSPA1A SNCB 25348397 N/A physical interaction ComPPI
HSPA1B SNCB 25348397 N/A physical interaction ComPPI
PLK1 SNCB 25348397 N/A physical interaction ComPPI
GRK1 SNCB 25348397 N/A physical interaction ComPPI
GRK6 SNCB 25348397 N/A physical interaction ComPPI
GRK5 SNCB 10852916 14525934 25348397 N/A experimental interaction detection,physical interaction,in vitro ComPPI,HPRD
SNCAIP SNCB 10319874 24234451 25348397 physical association anti tag coimmunoprecipitation ComPPI,IntAct
PLK3 SNCB 25348397 N/A physical interaction ComPPI
NUFIP1 SNCB 25348397 N/A physical interaction ComPPI
SNCA SNCB 11683992 14525934 25348397 N/A experimental interaction detection,physical interaction,in vitro,in vivo ComPPI,HPRD
SNCB SEPTIN4 12695511 14525934 25348397 N/A experimental interaction detection,in vitro,in vivo ComPPI,HPRD
SNCB CENPT 16169070 24234451 25348397 physical association two hybrid,two hybrid pooling approach,two hybrid fragment pooling approach ComPPI,IntAct
SNCB APP 14525934 25348397 9163350 N/A experimental interaction detection,physical interaction ComPPI,HPRD
SNCB LNX1 25348397 N/A physical interaction ComPPI
SNCB ARMC1 25348397 N/A physical interaction ComPPI
SNCB DGUOK 25348397 N/A physical interaction ComPPI
SNCB DNAAF2 25348397 N/A physical interaction ComPPI
SNCB AKT1 24234451 25348397 25640309 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
SNCB MORN4 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
CHEK1 SNCB 21699177 27898060 N/A N/A OmniPath
PLK2 SNCB 19889641 21849493 27898060 stimulant N/A OmniPath
PLK3 SNCB 19889641 21849493 27898060 stimulant N/A OmniPath
SNCB ELK1 11279280 27898060 N/A N/A OmniPath

Visualization










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