Gene Information gene info

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GENE：LDB2

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol LDB2
FullNmae LIM domain binding 2
LocusType gene with protein product
Status Approved
HGNC_id HGNC:6533
EnsembleID ENSG00000169744
Uniprot O43679

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
LDB2 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
LDB2 GO:0000122,GO:0001942,GO:0003712,GO:0005515,GO:0005634,GO:0005634,GO:0005654,GO:0005667,GO:0005730,GO:0005886,GO:0007399,GO:0010669,GO:0019899,GO:0030274,GO:0030274,GO:0030334,GO:0031252,GO:0035019,GO:0043549,GO:0044085,GO:0044089,GO:0045944

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
FOXP3 LDB2 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 LDB2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA LDB2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF LDB2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 LDB2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 LDB2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
GATA2 LDB2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A LDB2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
PRDM14 LDB2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
SPI1 LDB2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TRIM28 LDB2 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS000003ABC4 LDB2 19088304 25416803 mrna cleavage,inhibition array technology TarBase
URS00005D35D9 LDB2 23824327 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
RLIM LDB2 25361965 interaction type N/A PTMCode2
LDB2 RLIM 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
DGCR6L LDB2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
LMO4 LDB2 14525934 15231748 18330356 24234451 25348397 physical association two hybrid,coimmunoprecipitation,physical interaction,two hybrid array,two hybrid prey pooling approach,two hybrid ComPPI,HPRD,IntAct
TSNAX LDB2 18330356 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
EPM2AIP1 LDB2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
LHX4 LDB2 18330356 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
EGLN3 LDB2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SMARCD1 LDB2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
CTBP1 LDB2 25348397 N/A coimmunoprecipitation,physical interaction ComPPI
SDCBP LDB2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RLIM LDB2 10431247 11882901 14525934 24234451 25348397 ubiquitination reaction experimental interaction detection,pull down,in vitro ComPPI,HPRD,IntAct
ISL1 LDB2 25348397 N/A physical interaction ComPPI
LMO1 LDB2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
TTC19 LDB2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
LDB2 LHX9 14525934 25348397 27898060 9880598 N/A experimental interaction detection,in vitro ComPPI,HPRD,OmniPath
LDB2 SSBP4 25348397 N/A physical interaction ComPPI
LDB2 LMO3 18330356 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
LDB2 RASIP1 18330356 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
LDB2 RILP 18330356 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
LDB2 SSBP2 18330356 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
LDB2 SSBP3 18330356 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
LDB2 FOXA1 24234451 25348397 25609649 association physical interaction,tandem affinity purification ComPPI,IntAct
LDB2 BRCA1 25348397 N/A coimmunoprecipitation,physical interaction ComPPI
LDB2 LNX1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
LDB2 NTAQ1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
LDB2 C14ORF119 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
LDB2 LHX8 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
LDB2 EXOC3L1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PSMB1 LDB2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
CETN3 LDB2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
GGACT LDB2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct

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