Gene Information gene info

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GENE：NCAN

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol NCAN
FullNmae neurocan
LocusType gene with protein product
Status Approved
HGNC_id HGNC:2465
EnsembleID ENSG00000130287
Uniprot O14594

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
NCAN immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
NCAN GO:0001501,GO:0002052,GO:0005509,GO:0005540,GO:0005576,GO:0005615,GO:0005796,GO:0007155,GO:0007417,GO:0010001,GO:0030246,GO:0043202,GO:0045202,GO:0072534

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
GATA1 NCAN 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 NCAN 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
YBX1 NCAN 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
FOXP3 NCAN 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 NCAN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF NCAN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 NCAN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 NCAN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 NCAN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A NCAN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ZNF263 NCAN 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000148B91 NCAN 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00001CF056 NCAN 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00000ECE9C NCAN 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000007F792 NCAN 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00002EF20A NCAN 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS000021D7C8 NCAN 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS0000160683 NCAN 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00007455B8 NCAN 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000010BD8D NCAN 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000C48FA NCAN 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00005ECFE5 NCAN 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00003883FE NCAN 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000037D7E5 NCAN 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00001383CF NCAN 25416803 26701625 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
L1CAM NCAN 10934197 14525934 25348397 27898060 7513709 N/A experimental interaction detection,physical interaction,in vivo ComPPI,HPRD,OmniPath
HMGB1 NCAN 14525934 25348397 9507007 N/A experimental interaction detection,physical interaction,in vitro ComPPI,HPRD
NCAN CNTN2 14525934 25348397 27898060 8663515 N/A experimental interaction detection,physical interaction,in vitro ComPPI,HPRD,OmniPath
NCAN NCAM1 14525934 25348397 27898060 8910306 N/A experimental interaction detection,in vitro ComPPI,HPRD,OmniPath
NCAN PTN 14525934 25348397 9507007 N/A experimental interaction detection,in vitro ComPPI,HPRD
NCAN TNC 14525934 25348397 27898060 9341124 N/A experimental interaction detection,physical interaction ComPPI,HPRD,OmniPath
NCAN TNR 25348397 N/A physical interaction ComPPI
MAPT NCAN 24234451 26402096 association anti bait coimmunoprecipitation IntAct

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