GENE：ATF5
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | ATF5 |
| FullNmae | activating transcription factor 5 |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:790 |
| EnsembleID | ENSG00000169136 |
| Uniprot | Q9Y2D1 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| ATF5 | immunogenic | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| ATF5 | GO:0000785,GO:0000976,GO:0000977,GO:0000977,GO:0000981,GO:0001228,GO:0001228,GO:0003682,GO:0003700,GO:0003700,GO:0005515,GO:0005634,GO:0005634,GO:0005634,GO:0005654,GO:0005813,GO:0005829,GO:0006355,GO:0006357,GO:0006357,GO:0007623,GO:0008285,GO:0009791,GO:0015631,GO:0019900,GO:0021891,GO:0021930,GO:0035264,GO:0043066,GO:0043565,GO:0045444,GO:0045892,GO:0045893,GO:0045893,GO:0045944,GO:0046605,GO:0090575,GO:1902750 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| E2F4 | ATF5 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| ETS1 | ATF5 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| SPI1 | ATF5 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| DDIT3 | ATF5 | 16164412 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EBF1 | ATF5 | 20423929 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| NPM1 | ATF5 | 22528486 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS0000153377 | ATF5 | 23622248 25416803 | mrna cleavage,inhibition | clash | TarBase |
| URS00001E0AEA | ATF5 | 22473208 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000077DDE | ATF5 | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000298BA3 | ATF5 | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| ATF5 | CCND3 | 25361965 | interaction type | N/A | PTMCode2 |
| CCND3 | ATF5 | 25361965 | interaction type | N/A | PTMCode2 |
| CDC34 | ATF5 | 25361965 | interaction type | N/A | PTMCode2 |
| ATF5 | CDC34 | 25361965 | interaction type | N/A | PTMCode2 |
| CEBPG | ATF5 | 25361965 | interaction type | N/A | PTMCode2 |
| ATF5 | CEBPG | 25361965 | interaction type | N/A | PTMCode2 |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| TTR | ATF5 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| CEBPG | ATF5 | 1371974 14525934 20102225 24234451 25348397 | physical association | experimental interaction detection,peptide array,two hybrid array,in vitro,two hybrid prey pooling approach | ComPPI,HPRD,IntAct |
| TRIB3 | ATF5 | 12743605 24234451 25348397 | physical association | two hybrid,physical interaction | ComPPI,IntAct |
| ATXN1 | ATF5 | 23275563 24234451 25348397 | physical association | physical interaction,two hybrid prey pooling approach | ComPPI,IntAct |
| BATF | ATF5 | 20102225 24234451 25348397 | N/A | peptide array | ComPPI,IntAct |
| EP300 | ATF5 | 21791614 21988832 24234451 25348397 27898060 | physical association | two hybrid,physical interaction | ComPPI,IntAct,OmniPath |
| CDC34 | ATF5 | 10373550 14525934 18458088 24234451 25348397 27898060 | physical association | two hybrid,experimental interaction detection,physical interaction,in vivo,two hybrid | ComPPI,HPRD,IntAct,OmniPath |
| CEBPE | ATF5 | 25348397 | N/A | physical interaction | ComPPI |
| GPS2 | ATF5 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| GIT2 | ATF5 | 21988832 24234451 25348397 | physical association | two hybrid,physical interaction | ComPPI,IntAct |
| EIF2B1 | ATF5 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| GABBR1 | ATF5 | 11087824 14525934 25348397 | N/A | two hybrid,physical interaction,two hybrid | ComPPI,HPRD |
| ATF5 | GABBR2 | 11087824 14525934 25348397 | N/A | two hybrid,two hybrid | ComPPI,HPRD |
| ATF5 | CCND3 | 14525934 15358120 21988832 24234451 25348397 27898060 | physical association | two hybrid,experimental interaction detection,physical interaction,in vitro,in vivo,two hybrid | ComPPI,HPRD,IntAct,OmniPath |
| ATF5 | DISC1 | 12812986 14525934 24234451 25348397 | colocalization,physical association | anti tag coimmunoprecipitation,two hybrid,experimental interaction detection,physical interaction,fluorescence microscopy,two hybrid | ComPPI,HPRD,IntAct |
| ATF5 | CEBPA | 20102225 24234451 25348397 | N/A | peptide array,physical interaction | ComPPI,IntAct |
| ATF5 | CCDC6 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |