Gene Information gene info

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GENE：CBX6

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol CBX6
FullNmae chromobox 6
LocusType gene with protein product
Status Approved
HGNC_id HGNC:1556
EnsembleID ENSG00000183741
Uniprot O95503

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
CBX6 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
CBX6 GO:0000122,GO:0000122,GO:0000785,GO:0000792,GO:0003682,GO:0003727,GO:0005515,GO:0005634,GO:0005654,GO:0005654,GO:0006325,GO:0016604,GO:0031519,GO:0035064,GO:0035102

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
CBX6 hsa:23466 path:hsa03083 Polycomb repressive complex - Homo sapiens (human)

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
RNF2 CBX6 23180781 24457600 physical association anti tag coimmunoprecipitation InnateDB

Source Target Pmid Interactiontype Methods Database
E2F4 CBX6 17531812 18971253 trascriptional regulation,stimulation chromatin immunoprecipitation array,inferred by curator TFlink
GATA1 CBX6 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 CBX6 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
YBX1 CBX6 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 CBX6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF CBX6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXP1 CBX6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS CBX6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A CBX6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF CBX6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 CBX6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ZNF263 CBX6 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS000003ABC4 CBX6 19088304 25416803 mrna cleavage,inhibition array technology TarBase
URS000036AFF1 CBX6 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00003D5391 CBX6 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00005651EE CBX6 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00005FDE70 CBX6 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00001CC379 CBX6 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS0000031E12 CBX6 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS0000324096 CBX6 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00001481F9 CBX6 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00000B989F CBX6 20371350 21572407 23446348 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000BE495 CBX6 23446348 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000171CD1 CBX6 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000007D64A CBX6 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000041CB9C CBX6 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000040EE1D CBX6 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00000F0F49 CBX6 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00004719AB CBX6 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS0000259AE4 CBX6 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000058863C CBX6 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000054D341 CBX6 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00003E226A CBX6 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS0000209F04 CBX6 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000039607D CBX6 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000059EB31 CBX6 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS0000272A3D CBX6 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS0000076995 CBX6 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS0000070B1D CBX6 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000040780F CBX6 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000302909 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000026A1D CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000015CE89 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000024A59E CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000821E0 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00001C770D CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000016C318 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00003E6479 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002367FA CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00003804D8 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000157FBE CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000148B91 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000CF1D2 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00006097A6 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000000EF0B CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000419B5A CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000045ED38 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000027F5F3 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000759B6A CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00005D35D9 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00005F9738 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00001067D1 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000020579D CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000004BACE CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002578DA CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00001F373E CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000E7139 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000075D15B CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000076B539 CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002E728C CBX6 25416803 26701625 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
SFTPC CBX6 25348397 N/A physical interaction ComPPI
BMI1 CBX6 20601937 21282530 24234451 25348397 27705803 association,physical association anti tag coimmunoprecipitation,pull down,physical interaction,tandem affinity purification ComPPI,IntAct
RING1 CBX6 21282530 24234451 25348397 27705803 association,physical association anti tag coimmunoprecipitation,pull down,physical interaction,tandem affinity purification ComPPI,IntAct
PHC2 CBX6 24234451 25348397 27705803 association physical interaction,tandem affinity purification ComPPI,IntAct
PCGF2 CBX6 21282530 24234451 25348397 27705803 association pull down,physical interaction,tandem affinity purification ComPPI,IntAct
LTV1 CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
H4C1 CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
RPL10 CBX6 24234451 25348397 27705803 association tandem affinity purification ComPPI,IntAct
LYN CBX6 25348397 N/A physical interaction ComPPI
KHDRBS1 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
USP7 CBX6 20601937 24234451 25348397 physical association anti tag coimmunoprecipitation ComPPI,IntAct
NCOR2 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
PPP1R3A CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
YBX1 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
CHAF1A CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
CEP135 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
PABPC1 CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
H2BC21 CBX6 25348397 N/A physical interaction ComPPI
CBX4 CBX6 25348397 N/A physical interaction ComPPI
H1-4 CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
H3-4 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
H1-5 CBX6 25348397 N/A physical interaction ComPPI
H3C15 CBX6 18927235 24234451 25348397 N/A physical interaction,bimolecular fluorescence complementation ComPPI,IntAct
RNF2 CBX6 18927235 21282530 24234451 25348397 27705803 association,physical association anti tag coimmunoprecipitation,pull down,physical interaction,tandem affinity purification,bimolecular fluorescence complementation ComPPI,IntAct
CASQ2 CBX6 25348397 N/A physical interaction ComPPI
GNL3 CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
USP11 CBX6 20601937 24234451 25348397 physical association anti tag coimmunoprecipitation ComPPI,IntAct
SSB CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
H3C1 CBX6 18927235 24234451 25348397 N/A physical interaction,bimolecular fluorescence complementation ComPPI,IntAct
NUFIP2 CBX6 24234451 25348397 27705803 association tandem affinity purification ComPPI,IntAct
H3-3A CBX6 18927235 24234451 25348397 N/A physical interaction,bimolecular fluorescence complementation ComPPI,IntAct
ELAVL1 CBX6 25348397 N/A physical interaction ComPPI
ILF2 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
BPTF CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
KIF20B CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
CHAF1B CBX6 25348397 N/A physical interaction ComPPI
RAD17 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
PHC1 CBX6 24234451 25348397 27705803 association physical interaction,tandem affinity purification ComPPI,IntAct
ALYREF CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
PAIP1 CBX6 25348397 N/A physical interaction ComPPI
H2AC4 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
PCGF6 CBX6 21282530 24234451 25348397 N/A pull down,physical interaction ComPPI,IntAct
H1-2 CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
BRWD1 CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
UBE2O CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
DCAF7 CBX6 24234451 25348397 27705803 association physical interaction,tandem affinity purification ComPPI,IntAct
H2BC3 CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
ULK2 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
KNL1 CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
ZNF33A CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
TIMM50 CBX6 24234451 25348397 27705803 association tandem affinity purification ComPPI,IntAct
AHDC1 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
ILF3 CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
ERCC6 CBX6 25348397 N/A physical interaction ComPPI
RBM4B CBX6 25348397 N/A physical interaction ComPPI
PCGF1 CBX6 21282530 24234451 25348397 N/A pull down,physical interaction ComPPI,IntAct
CCDC158 CBX6 25348397 N/A physical interaction ComPPI
ZKSCAN7 CBX6 25348397 N/A physical interaction ComPPI
H1-1 CBX6 25348397 N/A physical interaction ComPPI
NUMA1 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
TUBA1C CBX6 24234451 25348397 27705803 association tandem affinity purification ComPPI,IntAct
NOA1 CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
DNMT1 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
KRI1 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
ZNF33B CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
RPS3 CBX6 24234451 25348397 27705803 association tandem affinity purification ComPPI,IntAct
IGF2BP2 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
IGF2BP1 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
CEP350 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
HOXC9 CBX6 25348397 N/A physical interaction ComPPI
FOXK2 CBX6 25348397 N/A physical interaction ComPPI
APP CBX6 25348397 N/A physical interaction ComPPI
IGF2BP3 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
LAS1L CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
MOV10 CBX6 20543829 21282530 24234451 25348397 association,physical association anti tag coimmunoprecipitation,physical interaction,tandem affinity purification ComPPI,IntAct
NCL CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
ELP4 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
ERCC6 CBX6 25348397 N/A physical interaction ComPPI
H1-10 CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
ZMYM4 CBX6 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
SCML2 CBX6 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
USP26 CBX6 25348397 N/A physical interaction ComPPI
CGRRF1 CBX6 25348397 N/A physical interaction ComPPI
PHC3 CBX6 24234451 25348397 27705803 association physical interaction,tandem affinity purification ComPPI,IntAct
CBX6 DACT1 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
CBX6 RTL9 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
CBX6 TOPAZ1 21282530 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
CBX6 RNF213 25348397 N/A physical interaction ComPPI
CBX6 PCGF3 21282530 24234451 25348397 physical association anti tag coimmunoprecipitation,pull down,physical interaction ComPPI,IntAct
CBX6 PCGF5 21282530 24234451 25348397 N/A pull down,physical interaction ComPPI,IntAct
CBX6 IQCH 25348397 N/A physical interaction ComPPI
CBX6 GPR173 25348397 N/A physical interaction ComPPI
CBX6 ZNF131 25348397 N/A physical interaction ComPPI
CBX6 PCDH20 25348397 N/A physical interaction ComPPI
CBX6 PCDHGA5 25348397 N/A physical interaction ComPPI
CBX6 PCDHB16 25348397 N/A physical interaction ComPPI
CBX6 PCDHGB4 25348397 N/A physical interaction ComPPI
CBX6 PCDHB11 25348397 N/A physical interaction ComPPI
CBX6 ZNF214 25348397 N/A physical interaction ComPPI
CBX6 ERCC6L2 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
CBX6 DCAF12L2 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
CBX6 ESF1 21282530 24234451 25348397 association tandem affinity purification ComPPI,IntAct
CBX6 SCML1 24234451 25348397 27705803 association tandem affinity purification ComPPI,IntAct
CBX6 RAB34 24234451 30021884 physical association cross-linking study IntAct

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