GeneInfo:
GeneAttribute |
GeneDescription |
GeneSymbol |
LRRC28 |
FullNmae |
leucine rich repeat containing 28 |
LocusType |
gene with protein product |
Status |
Approved |
HGNC_id |
HGNC:28355 |
EnsembleID |
ENSG00000168904 |
Uniprot |
Q86X40 |
Protein Structure:
Gene Description in Publicaton:
GeneSymbol |
CellDeathType |
PMID |
Description |
GeneType |
LRRC28 |
immunogenic |
38538696 |
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) |
retulator signature |
Go Annotation:
GeneSymbol |
Go id |
LRRC28 |
GO:0007165 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
AR |
LRRC28 |
20610535
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation array |
TFlink |
E2F4 |
LRRC28 |
17531812
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation array |
TFlink |
ETS1 |
LRRC28 |
18971253
20019798
|
trascriptional regulation,stimulation |
inferred by curator,chromatin immunoprecipitation assay |
TFlink |
FOXP3 |
LRRC28 |
20554955
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation array |
TFlink |
SMARCA4 |
LRRC28 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
CEBPA |
LRRC28 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
CTCF |
LRRC28 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
EGR1 |
LRRC28 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
FOXA1 |
LRRC28 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
FOS |
LRRC28 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
GATA2 |
LRRC28 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
HNF4A |
LRRC28 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
MITF |
LRRC28 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
TP53 |
LRRC28 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
URS00000EED18 |
LRRC28 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
CUL5 |
LRRC28 |
25348397
|
N/A |
physical interaction |
ComPPI |
HSPA8 |
LRRC28 |
25348397
|
N/A |
physical interaction |
ComPPI |
NFATC1 |
LRRC28 |
25348397
|
N/A |
physical interaction |
ComPPI |
HSPA1A |
LRRC28 |
25348397
|
N/A |
physical interaction |
ComPPI |
HSPA1B |
LRRC28 |
25348397
|
N/A |
physical interaction |
ComPPI |
CCT7 |
LRRC28 |
25348397
|
N/A |
physical interaction |
ComPPI |
HSPD1 |
LRRC28 |
25348397
|
N/A |
physical interaction |
ComPPI |
HSPA6 |
LRRC28 |
25348397
|
N/A |
physical interaction |
ComPPI |
HSPA1L |
LRRC28 |
25348397
|
N/A |
physical interaction |
ComPPI |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
URS00009B472C |
LRRC28 |
27087310
|
direct interaction,inhibition |
N/A |
NPInter |
Visualization