Gene Information gene info

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GENE：SNX27

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SNX27
FullNmae sorting nexin 27
LocusType gene with protein product
Status Approved
HGNC_id HGNC:20073
EnsembleID ENSG00000143376
Uniprot Q96L92

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SNX27 lysosomal_cd 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
SNX27 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SNX27 GO:0001770,GO:0001772,GO:0005515,GO:0005768,GO:0005769,GO:0005769,GO:0005829,GO:0006886,GO:0006886,GO:0007165,GO:0008333,GO:0016197,GO:0031901,GO:0032266,GO:0032456,GO:0035091,GO:0043231,GO:0098685,GO:0098978,GO:0099072

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
CYTIP SNX27 17577583 23180781 physical association anti tag coimmunoprecipitation InnateDB
CYTH1 SNX27 17577583 23180781 physical association anti tag coimmunoprecipitation InnateDB

Source Target Pmid Interactiontype Methods Database
AR SNX27 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 SNX27 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA1 SNX27 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 SNX27 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 SNX27 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA SNX27 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SNX27 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 SNX27 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 SNX27 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 SNX27 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 SNX27 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS SNX27 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A SNX27 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF SNX27 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 SNX27 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS000075A513 SNX27 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000003ABC4 SNX27 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000006372A SNX27 22927820 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001C0099 SNX27 22927820 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000355E82 SNX27 22927820 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00003FBC84 SNX27 22927820 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000041FA2C SNX27 22927820 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00002A8BC6 SNX27 22927820 25416803 mrna cleavage,inhibition clip TarBase
URS000075A760 SNX27 22927820 25416803 mrna cleavage,inhibition clip TarBase
URS00002152A8 SNX27 22927820 25416803 mrna cleavage,inhibition clip TarBase
URS0000137EDE SNX27 22927820 25416803 mrna cleavage,inhibition clip TarBase
URS000019907A SNX27 22927820 25416803 mrna cleavage,inhibition clip TarBase
URS00001C770D SNX27 22927820 25416803 mrna cleavage,inhibition clip TarBase
URS00000C4DB5 SNX27 22927820 25416803 mrna cleavage,inhibition clip TarBase
URS00004F2EB0 SNX27 22927820 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
PHLPP2 SNX27 25361965 interaction type N/A PTMCode2
SNX27 PHLPP2 25361965 interaction type N/A PTMCode2
DGKZ SNX27 25361965 interaction type N/A PTMCode2
SNX27 DGKZ 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
TTR SNX27 25348397 N/A physical interaction ComPPI
CST1 SNX27 25348397 N/A physical interaction ComPPI
SERPINA3 SNX27 25348397 N/A physical interaction ComPPI
APOA1 SNX27 25348397 N/A physical interaction ComPPI
NTRK1 SNX27 25348397 N/A physical interaction ComPPI
DGKZ SNX27 14525934 17351151 25348397 27898060 N/A two hybrid,experimental interaction detection,in vivo,two hybrid ComPPI,HPRD,OmniPath
KNG1 SNX27 25348397 N/A physical interaction ComPPI
SELP SNX27 25348397 N/A physical interaction ComPPI
PIGR SNX27 25348397 N/A physical interaction ComPPI
C4A SNX27 25348397 N/A physical interaction ComPPI
APOA4 SNX27 25348397 N/A physical interaction ComPPI
SERPINA1 SNX27 25348397 N/A physical interaction ComPPI
USB1 SNX27 25348397 N/A physical interaction ComPPI
C3 SNX27 25348397 N/A physical interaction ComPPI
CFTR SNX27 25348397 N/A physical interaction ComPPI
LTF SNX27 25348397 N/A physical interaction ComPPI
DMBT1 SNX27 25348397 N/A physical interaction ComPPI
EEA1 SNX27 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RASSF1 SNX27 25348397 N/A physical interaction ComPPI
CENPJ SNX27 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LACRT SNX27 25348397 N/A physical interaction ComPPI
FGB SNX27 25348397 N/A physical interaction ComPPI
CDK16 SNX27 25348397 N/A physical interaction ComPPI
INSR SNX27 25348397 N/A physical interaction ComPPI
TRIM25 SNX27 25348397 N/A physical interaction ComPPI
ELAVL1 SNX27 25348397 N/A physical interaction ComPPI
TGOLN2 SNX27 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
SCGB1D1 SNX27 25348397 N/A physical interaction ComPPI
SCGB2A1 SNX27 25348397 N/A physical interaction ComPPI
JCHAIN SNX27 25348397 N/A physical interaction ComPPI
CP SNX27 25348397 N/A physical interaction ComPPI
HP SNX27 25348397 N/A physical interaction ComPPI
CHRDL1 SNX27 25348397 N/A physical interaction ComPPI
LCN2 SNX27 25348397 N/A physical interaction ComPPI
MCC SNX27 19555689 24234451 25348397 physical association pull down ComPPI,IntAct
MSH2 SNX27 25348397 N/A physical interaction ComPPI
FGG SNX27 25348397 N/A physical interaction ComPPI
AKT2 SNX27 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
ALB SNX27 25348397 N/A physical interaction ComPPI
AHSG SNX27 25348397 N/A physical interaction ComPPI
VPS26B SNX27 25348397 N/A physical interaction ComPPI
LYZ SNX27 25348397 N/A physical interaction ComPPI
SNX27 PHLPP2 19615732 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SNX27 PHLPP1 19615732 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SNX27 PNPLA3 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
SNX27 HLCS 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
SNX27 ABCC4 22411990 25348397 27898060 N/A physical interaction ComPPI,OmniPath
SNX27 APP 25348397 N/A physical interaction ComPPI
SNX27 TIGD6 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SNX27 CDS1 25348397 N/A physical interaction ComPPI
SNX27 BPIFA1 25348397 N/A physical interaction ComPPI
SNX27 PRR4 25348397 N/A physical interaction ComPPI
SNX27 FIG4 25348397 N/A physical interaction ComPPI
SNX27 ORM1 25348397 N/A physical interaction ComPPI
SNX27 LRRC36 25348397 N/A physical interaction ComPPI
SNX27 GPR156 25348397 N/A physical interaction ComPPI
SNX27 MRAP2 25348397 N/A physical interaction ComPPI
SNX27 BPIFB1 25348397 N/A physical interaction ComPPI
SNX27 TF 25348397 N/A physical interaction ComPPI
SNX27 PROSER2 25348397 N/A physical interaction ComPPI
SNX27 LEG1 25348397 N/A physical interaction ComPPI
SNX27 HPX 25348397 N/A physical interaction ComPPI
SNX27 TAFA3 25348397 N/A physical interaction ComPPI
SNX27 ZG16B 25348397 N/A physical interaction ComPPI
SNX27 IGLL5 25348397 N/A physical interaction ComPPI
SNX27 LCN1 25348397 N/A physical interaction ComPPI
SNX27 LCN1P1 25348397 N/A physical interaction ComPPI
SNX27 CST4 25348397 N/A physical interaction ComPPI
SNX27 PIBF1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SNX27 PTPRQ 24234451 25348397 physical association inference by socio-affinity scoring ComPPI,IntAct
FGA SNX27 25348397 N/A physical interaction ComPPI
LRFN4 SNX27 22677168 24234451 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
HSPD1 SNX27 24234451 30021884 physical association cross-linking study IntAct

Visualization










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