GeneInfo:
| GeneAttribute |
GeneDescription |
| GeneSymbol |
SLC12A4 |
| FullNmae |
solute carrier family 12 member 4 |
| LocusType |
gene with protein product |
| Status |
Approved |
| HGNC_id |
HGNC:10913 |
| EnsembleID |
ENSG00000124067 |
| Uniprot |
Q9UP95 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol |
CellDeathType |
PMID |
Description |
GeneType |
| SLC12A4 |
immunogenic |
38538696 |
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) |
retulator signature |
Go Annotation:
| GeneSymbol |
Go id |
| SLC12A4 |
GO:0005515,GO:0005524,GO:0005765,GO:0005886,GO:0005886,GO:0005886,GO:0006811,GO:0006884,GO:0007268,GO:0008519,GO:0015379,GO:0015379,GO:0015379,GO:0015379,GO:0016020,GO:0019901,GO:0045202,GO:0055064,GO:0055064,GO:0055075,GO:0055075,GO:0071805,GO:0140157,GO:1902476,GO:1990573 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
| GATA2 |
SLC12A4 |
19941826
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
| TFAP2C |
SLC12A4 |
20629094
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
| SMARCA4 |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| CTCF |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| E2F1 |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| E2F4 |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| EGR1 |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| HNF4A |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| TP53 |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| ZNF263 |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
| URS0000065D58 |
SLC12A4 |
18668040
25416803
|
mrna cleavage,inhibition |
experimental interaction detection,experimental interaction detection,experimental interaction detection |
TarBase |
| URS0000338542 |
SLC12A4 |
18668040
25416803
|
mrna cleavage,inhibition |
experimental interaction detection |
TarBase |
| URS00000C85B2 |
SLC12A4 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
| URS000000B1C9 |
SLC12A4 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
| Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
| STK39 |
SLC12A4 |
22135298
|
phosphorylation |
N/A |
PhosphoSite |
| Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
| LGALS3 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| KRTAP12-2 |
SLC12A4 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
| LGALS9C |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| AP3M1 |
SLC12A4 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
| LYN |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| PTH1R |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| CHRND |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| LGALS8 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| PLP2 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| TRIM25 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| TNFRSF10A |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| TGOLN2 |
SLC12A4 |
24234451
25348397
29568061
|
association |
proximity-dependent biotin identification |
ComPPI,IntAct |
| BET1 |
SLC12A4 |
24234451
25348397
29568061
|
association |
proximity-dependent biotin identification |
ComPPI,IntAct |
| FLOT1 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| TMEM102 |
SLC12A4 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
| ILF3 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| HSD17B10 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| ZNF655 |
SLC12A4 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
| FAM189A2 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| CD55 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| TMEM43 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
| TMEM216 |
SLC12A4 |
24234451
25348397
26638075
|
association |
physical interaction,proximity-dependent biotin identification |
ComPPI,IntAct |
| MTNR1B |
SLC12A4 |
24234451
25348397
26514267
|
physical association |
two hybrid,physical interaction |
ComPPI,IntAct |
| SLC12A4 |
LGALS9 |
25348397
|
N/A |
physical interaction |
ComPPI |
| SLC12A4 |
LYPD6 |
25348397
|
N/A |
physical interaction |
ComPPI |
| SLC12A4 |
TMEM17 |
24234451
25348397
26638075
|
association |
physical interaction,proximity-dependent biotin identification |
ComPPI,IntAct |
| SLC12A4 |
PPM1H |
25348397
|
N/A |
physical interaction |
ComPPI |
| SLC12A4 |
NRN1 |
25348397
|
N/A |
physical interaction |
ComPPI |
| SLC12A4 |
IL17RC |
25348397
|
N/A |
physical interaction |
ComPPI |
| SLC12A4 |
SLC17A2 |
25348397
|
N/A |
physical interaction |
ComPPI |
| SLC12A4 |
GPR21 |
25348397
|
N/A |
physical interaction |
ComPPI |
| SLC12A4 |
PCDHA3 |
25348397
|
N/A |
physical interaction |
ComPPI |
| SLC12A4 |
PCDHB16 |
25348397
|
N/A |
physical interaction |
ComPPI |
| SLC12A4 |
FAM189B |
25348397
|
N/A |
physical interaction |
ComPPI |
| SLC12A4 |
ATF7IP |
14525934
15231748
24234451
25348397
|
physical association |
two hybrid,two hybrid |
ComPPI,HPRD,IntAct |
| SLC12A4 |
CYSRT1 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
| SLC12A4 |
CNFN |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
| SLC12A4 |
MB21D2 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
| SLC12A4 |
KRTAP19-2 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
Visualization