GeneInfo:
GeneAttribute |
GeneDescription |
GeneSymbol |
SLC12A4 |
FullNmae |
solute carrier family 12 member 4 |
LocusType |
gene with protein product |
Status |
Approved |
HGNC_id |
HGNC:10913 |
EnsembleID |
ENSG00000124067 |
Uniprot |
Q9UP95 |
Protein Structure:
Gene Description in Publicaton:
GeneSymbol |
CellDeathType |
PMID |
Description |
GeneType |
SLC12A4 |
immunogenic |
38538696 |
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) |
retulator signature |
Go Annotation:
GeneSymbol |
Go id |
SLC12A4 |
GO:0005515,GO:0005524,GO:0005765,GO:0005886,GO:0005886,GO:0005886,GO:0006811,GO:0006884,GO:0007268,GO:0008519,GO:0015379,GO:0015379,GO:0015379,GO:0015379,GO:0016020,GO:0019901,GO:0045202,GO:0055064,GO:0055064,GO:0055075,GO:0055075,GO:0071805,GO:0140157,GO:1902476,GO:1990573 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
GATA2 |
SLC12A4 |
19941826
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
TFAP2C |
SLC12A4 |
20629094
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
SMARCA4 |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
CTCF |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
E2F1 |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
E2F4 |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
EGR1 |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
HNF4A |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
TP53 |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
ZNF263 |
SLC12A4 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
URS0000065D58 |
SLC12A4 |
18668040
25416803
|
mrna cleavage,inhibition |
experimental interaction detection,experimental interaction detection,experimental interaction detection |
TarBase |
URS0000338542 |
SLC12A4 |
18668040
25416803
|
mrna cleavage,inhibition |
experimental interaction detection |
TarBase |
URS00000C85B2 |
SLC12A4 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
URS000000B1C9 |
SLC12A4 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
STK39 |
SLC12A4 |
22135298
|
phosphorylation |
N/A |
PhosphoSite |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
LGALS3 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
KRTAP12-2 |
SLC12A4 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
LGALS9C |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
AP3M1 |
SLC12A4 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
LYN |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
PTH1R |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
CHRND |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
LGALS8 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
PLP2 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
TRIM25 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
TNFRSF10A |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
TGOLN2 |
SLC12A4 |
24234451
25348397
29568061
|
association |
proximity-dependent biotin identification |
ComPPI,IntAct |
BET1 |
SLC12A4 |
24234451
25348397
29568061
|
association |
proximity-dependent biotin identification |
ComPPI,IntAct |
FLOT1 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
TMEM102 |
SLC12A4 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
ILF3 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
HSD17B10 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
ZNF655 |
SLC12A4 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
FAM189A2 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
CD55 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
TMEM43 |
SLC12A4 |
25348397
|
N/A |
physical interaction |
ComPPI |
TMEM216 |
SLC12A4 |
24234451
25348397
26638075
|
association |
physical interaction,proximity-dependent biotin identification |
ComPPI,IntAct |
MTNR1B |
SLC12A4 |
24234451
25348397
26514267
|
physical association |
two hybrid,physical interaction |
ComPPI,IntAct |
SLC12A4 |
LGALS9 |
25348397
|
N/A |
physical interaction |
ComPPI |
SLC12A4 |
LYPD6 |
25348397
|
N/A |
physical interaction |
ComPPI |
SLC12A4 |
TMEM17 |
24234451
25348397
26638075
|
association |
physical interaction,proximity-dependent biotin identification |
ComPPI,IntAct |
SLC12A4 |
PPM1H |
25348397
|
N/A |
physical interaction |
ComPPI |
SLC12A4 |
NRN1 |
25348397
|
N/A |
physical interaction |
ComPPI |
SLC12A4 |
IL17RC |
25348397
|
N/A |
physical interaction |
ComPPI |
SLC12A4 |
SLC17A2 |
25348397
|
N/A |
physical interaction |
ComPPI |
SLC12A4 |
GPR21 |
25348397
|
N/A |
physical interaction |
ComPPI |
SLC12A4 |
PCDHA3 |
25348397
|
N/A |
physical interaction |
ComPPI |
SLC12A4 |
PCDHB16 |
25348397
|
N/A |
physical interaction |
ComPPI |
SLC12A4 |
FAM189B |
25348397
|
N/A |
physical interaction |
ComPPI |
SLC12A4 |
ATF7IP |
14525934
15231748
24234451
25348397
|
physical association |
two hybrid,two hybrid |
ComPPI,HPRD,IntAct |
SLC12A4 |
CYSRT1 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
SLC12A4 |
CNFN |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
SLC12A4 |
MB21D2 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
SLC12A4 |
KRTAP19-2 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
Visualization