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GENE：COL27A1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol COL27A1
FullNmae collagen type XXVII alpha 1 chain
LocusType gene with protein product
Status Approved
HGNC_id HGNC:22986
EnsembleID ENSG00000196739
Uniprot Q8IZC6

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
COL27A1 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
COL27A1 GO:0001501,GO:0001525,GO:0001886,GO:0003431,GO:0005576,GO:0005581,GO:0005583,GO:0005615,GO:0005788,GO:0030020,GO:0030020,GO:0030199,GO:0030903,GO:0046872,GO:0062023,GO:0062023

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
COL27A1 hsa:85301 path:hsa04974 Protein digestion and absorption - Homo sapiens (human)

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR COL27A1 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
GATA1 COL27A1 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 COL27A1 18971253 19941826 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
YBX1 COL27A1 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 COL27A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA COL27A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF COL27A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 COL27A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 COL27A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 COL27A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXP1 COL27A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS COL27A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A COL27A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TP53 COL27A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ZNF263 COL27A1 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS000035CC3E COL27A1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000043F369 COL27A1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000006B702 COL27A1 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS000040FA88 COL27A1 25416803 27418678 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
MCPH1 COL27A1 25348397 N/A physical interaction ComPPI

Visualization










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